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Series GSE136344 Query DataSets for GSE136344
Status Public on May 05, 2021
Title Muscle transcriptomic profiling of chronological aging and metabolic syndrome in men
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Skeletal muscle aging is characterized by a progressive decline in muscle mass and function, which is referred to as sarcopenia. Aging is also a primary risk factor for metabolic syndrome (SX), which is a cluster of risk factors for cardiovascular diseases and type 2 diabetes. However, the molecular mechanisms implicated in sarcopenia and changes in muscle proteome associated with SX in elderly men remain unclear.
In this dataset, we include the expression data obtained from vastus lateralis muscle biopsies of young and old men with or without metabolic syndrome. These data are used to identify 479 genes that are differentially expressed with aging, 328 being associated with aging alone and 117 with metabolic syndrome.
 
Overall design 30 Total samples were analyzed. Data were processed using GeneSpring GX 14.9 13 (Agilent) and analyzed by oneway ANOVA followed by pairwise comparisons using Tukey HSD post Hoc test. Benjamini-Hochberg multiple testing correction were performed to identify differentially expressed entities with a significance threshold set at P < 0.05. We generated the following pairwise comparisons using : young (YO) vs. healthy old (EL), EL vs. old with metabolic syndrome (SX), YO vs. SX.
 
Contributor(s) Bechet D, Gueugneau M, Coudy-Gandilhon C
Citation(s) 33921590
Submission date Aug 26, 2019
Last update date May 05, 2021
Contact name Daniel Bechet
E-mail(s) daniel.bechet@inrae.fr
Phone 33473624178
Organization name INRA
Department UNH
Lab Proteostasis
Street address Theix
City Saint Genes Champanelle
ZIP/Postal code 63122
Country France
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (30)
GSM4047076 Muscle_young_biological rep1
GSM4047077 Muscle_young_biological rep2
GSM4047078 Muscle_young_biological rep3
Relations
BioProject PRJNA562256

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136344_RAW.tar 659.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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