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Series GSE143295 Query DataSets for GSE143295
Status Public on May 05, 2020
Title Neuroligin 3 Splice Isoforms Shape Mouse Hippocampal Inhibitory Synaptic Function
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Synapse formation is a dynamic process essential for neuronal circuit development and maturation. At the synaptic cleft, trans-synaptic protein-protein interactions constitute major biological determinants of proper synapse efficacy. The balance of excitatory and inhibitory synaptic transmission (E-I balance) stabilizes synaptic activity and its dysregulation has been implicated in neurodevelopmental disorders including autism spectrum disorders. However, the molecular mechanisms underlying E-I balance remains to be elucidated. Here, we investigate Neuroligin (Nlgn) genes which encode a family of postsynaptic adhesion molecules that shape excitatory and inhibitory synaptic function. We identified that NLGN3 protein differentially regulates inhibitory synaptic transmission in a splice isoform-dependent manner in hippocampal CA1 synapses. Distinct subcellular localization patterns of NLGN3 isoforms contribute to the functional differences observed among splice variants. Finally, our single-cell sequencing analysis reveals that Nlgn1 and Nlgn3 are the major Nlgn genes and that Nlgn splice isoforms are highly diverse in CA1 pyramidal neurons.
 
Overall design The cytosol of single cell CA1 neuron was harvested using the whole cell patch-clamp technique
 
Contributor(s) Uchigashima M, Leung M, Watanabe T, Cheung A, Watanabe M, Imamura Kawasawa Y, Futai K
Citation(s) 32381505
Submission date Jan 08, 2020
Last update date Aug 04, 2020
Contact name Yuka Imamura Kawasawa
E-mail(s) yui102@psu.edu
Organization name Penn State University
Department College of Medicine, Pharmacology
Street address 500 University Dr.
City Hershey
State/province PA
ZIP/Postal code 17033
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM4256509 single cell replicate 02
GSM4256510 single cell replicate 03
GSM4256511 single cell replicate 04
Relations
BioProject PRJNA599927
SRA SRP240353

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Supplementary file Size Download File type/resource
GSE143295_G481_TPM.csv.gz 344.2 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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