|
| Status |
Public on Sep 29, 2020 |
| Title |
Genomic distribution of Spindlin1, H3K4me3 and H3K9me3 in HEK293 cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed colocalization studies of Spindlin1 and H3"K4me3-K9me3" and found two kinds of genome distribution patterns in overlapping peaks. One is that Spindlin1, H3K4me3 and H3K9me3 are distributed with sharp peaks in the promoter regions of some genes in euchromatin, and the other is that Spindlin1 and H3K4me3 coexist with sharp peaks in genome regions where H3K9me3 is widely distributed.
|
| |
|
| Overall design |
Detect genomic distribution pattern of Spindlin1, histone modification H3K4me3 and H3K9me3 in HEK293 cells.
|
| |
|
| Contributor(s) |
Zhao F, Liu Y, Gao J, Zhang M, Li H |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Mar 30, 2020 |
| Last update date |
Oct 01, 2020 |
| Contact name |
Fan Zhao |
| E-mail(s) |
kibm@sina.com
|
| Organization name |
Tsinghua University
|
| Street address |
Qinghuayuan
|
| City |
Beijing |
| ZIP/Postal code |
100084 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA616363 |
| SRA |
SRP254661 |
Less...
More...