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Series GSE180286 Query DataSets for GSE180286
Status Public on Oct 13, 2021
Title Single-cell RNA sequencing reveals the mechanism of human breast cancer metastasis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To obtain more information about the lymph node metastasis of breast cancer cells, we selected the matched primary breast cancer (PC) and 2 lymph nodes (LN) of 5 patients to perform integrated analysis. The PC, LN samples were analysed with single-cell RNA sequencing.
 
Overall design The matched primary breast cancer (PC) and 2 lymph nodes (LN) samples were analysed with single-cell RNA sequencing.
 
Contributor(s) Xu K
Citation(s) 34611125, 36148946
Submission date Jul 17, 2021
Last update date Mar 02, 2023
Contact name kun xu
E-mail(s) njmuxukun@126.com
Organization name Department of Oncology, The First Affiliated Hospital of Nanjing Medical University
Street address 300 Guangzhou Road
City Nanjing
ZIP/Postal code 210029
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (15)
GSM5457199 P1-primary breast cancer-scRNA
GSM5457200 P1-lymph node 1-scRNA
GSM5457201 P1-lymph node 2-scRNA
Relations
BioProject PRJNA747693
SRA SRP328759

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180286_RAW.tar 106.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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