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Status |
Public on Jul 01, 2019 |
Title |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion |
Organisms |
Homo sapiens; Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
- Wilson MR, Reske JJ, Holladay J, Wilber GE et al. ARID1A and PI3-kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion. Nat Commun 2019 Aug 7;10(1):3554. PMID: 31391455
- Reske JJ, Wilson MR, Chandler RL. ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation. Epigenetics Chromatin 2020 Apr 22;13(1):22. PMID: 32321567
- Wilson MR, Reske JJ, Koeman J, Adams M et al. SWI/SNF Antagonism of PRC2 Mediates Estrogen-Induced Progesterone Receptor Expression. Cells 2022 Mar 15;11(6). PMID: 35326450
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Submission date |
Oct 12, 2018 |
Last update date |
Mar 31, 2022 |
Contact name |
Ronald L. Chandler |
E-mail(s) |
rlc@msu.edu
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Organization name |
Michigan State University
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Department |
Obstetrics, Gynecology and Reproductive Biology
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Street address |
3100-4 400 Monroe NW
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City |
Grand Rapids |
State/province |
MI |
ZIP/Postal code |
49503 |
Country |
USA |
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Platforms (2) |
GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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Samples (51)
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This SuperSeries is composed of the following SubSeries:
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GSE129779 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_1A_PI3K_RNA-seq] |
GSE129780 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_ATAC-seq] |
GSE129781 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_ChIP-seq] |
GSE129782 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_RNA-seq] |
GSE129783 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [Mouse_ATAC-seq] |
GSE129784 |
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [Mouse_RNA-seq] |
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Relations |
BioProject |
PRJNA496062 |