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Series GSE133476 Query DataSets for GSE133476
Status Public on Jun 29, 2019
Title Transcriptome profiling for floral bud development in reblooming cultivar 'High Noon' of Paeonia suffruticosa
Organism Paeonia lutea x Paeonia suffruticosa
Experiment type Expression profiling by high throughput sequencing
Summary To examine the mechanisms that control flower development, we sequenced the flower bud transcriptomes of ‘High Noon’, a reblooming cultivar of P. suffruticosa × P. lutea. Both full-length isoforms and RNA-seq were sequenced in 3 floral developmental stages. A total of 15.94 Gb raw data and 457.0 million reads were generated in full-length transcript sequencing and RNA-seq.
 
Overall design The 3 stage of the floal development in tree peony was sequenced and analyzed, each stage with 3 repeats.
 
Contributor(s) Chang Y, Hu T, Zhang W, Jiang Z
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Submission date Jun 28, 2019
Last update date Jul 01, 2019
Contact name Yanting Chang
E-mail(s) cytcyt123456@126.com
Organization name International Centre for Bamboo and Rattan
Department State Forestry Administration, Institute of Horticultural Flower and Landscape
Street address Futongdong Rd, Wang Jing, Chaoyang District
City Beijing
ZIP/Postal code 100102
Country China
 
Platforms (1)
GPL26859 Illumina HiSeq 2000 (Paeonia lutea x Paeonia suffruticosa)
Samples (9)
GSM3909906 HNS1_rep1
GSM3909907 HNS1_rep2
GSM3909908 HNS1_rep3
Relations
BioProject PRJNA551579
SRA SRP212254

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133476_HN_bud.FL_NR.fasta.gz 75.0 Mb (ftp)(http) FASTA
GSE133476_RAW.tar 11.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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