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Series GSE160001 Query DataSets for GSE160001
Status Public on Oct 26, 2020
Title FOXA1-dependent responses of the HER2+ SKBR-3 cell line to lapatinib
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary SKBR-3 HER2+ breast cancer cells were treated with 25 nM Dharmacon siGENOME non-targeting (NT) siRNA control pool or siRNA pool targeting FOXA1 for 48h, then treated with either DMSO or 300nM lapatinib for 24h.
 
Overall design 12 experimental samples
 
Contributor(s) Johnson GL, Angus SP
Citation(s) 33980863
Submission date Oct 23, 2020
Last update date May 10, 2023
Contact name Steven P Angus
E-mail(s) sangus@iu.edu
Phone 317-274-8911
Organization name Indiana University School of Medicine
Department Pediatrics
Street address 1044 W Walnut St
City Indianapolis
State/province IN
ZIP/Postal code 46202
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM4852352 SKBR3_siNT_DMSO_24h_rep1
GSM4852353 SKBR3_siNT_DMSO_24h_rep2
GSM4852354 SKBR3_siNT_DMSO_24h_rep3
This SubSeries is part of SuperSeries:
GSE160670 Adaptive responses to HER2-directed therapy in breast cancer cell line models
Relations
BioProject PRJNA671641
SRA SRP288463

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160001_RAW.tar 8.5 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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