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Series GSE160670 Query DataSets for GSE160670
Status Public on Nov 03, 2020
Title Adaptive responses to HER2-directed therapy in breast cancer cell line models
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33980863
Submission date Nov 02, 2020
Last update date Jun 26, 2021
Contact name Steven P Angus
E-mail(s) sangus@iu.edu
Phone 317-274-8911
Organization name Indiana University School of Medicine
Department Pediatrics
Street address 1044 W Walnut St
City Indianapolis
State/province IN
ZIP/Postal code 46202
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (96)
GSM4852352 SKBR3_siNT_DMSO_24h_rep1
GSM4852353 SKBR3_siNT_DMSO_24h_rep2
GSM4852354 SKBR3_siNT_DMSO_24h_rep3
This SuperSeries is composed of the following SubSeries:
GSE160001 FOXA1-dependent responses of the HER2+ SKBR-3 cell line to lapatinib
GSE160018 Adaptive responses of the HER2+ SKBR-3 and BT474m1 cell lines to lapatinib and JQ1
GSE160667 Enhancer analysis of HER2+ cell lines SKBR-3 (ER-) and BT474m1 (ER+) in response to lapatinib and JQ1 and analysis of FOXA1 chromatin binding in SKBR-3 cells in response to lapatinib and JQ1 and impact of FOXA1 knockdown on BRD4 and MED1
Relations
BioProject PRJNA673897

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160670_RAW.tar 13.0 Gb (http)(custom) TAR (of BW, CSV, TXT)
SRA Run SelectorHelp
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