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Series GSE162122 Query DataSets for GSE162122
Status Public on Aug 27, 2022
Title Single cell RNA-seq analysis on human myometrium and leiomyomas
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To understand the cellular and molecular heterogeneity in the normal myometrium, we performed single-cell RNA sequencing on normal myometrium samples. We discovered 17 different cell lineages in the normal myometrium. Our work provides a single cell atlas for the normal myometrium.
 
Overall design Single cell data is provided from 5 normal myometrium samples, and 5 MED12 positive leiomyomas.
 
Contributor(s) Goad J, Rajkovic A
Citation(s) 36001050
Submission date Nov 24, 2020
Last update date Nov 29, 2022
Contact name Jyoti Goad
E-mail(s) jyoti.goad@ucsf.edu
Organization name University of California, San Francisco
Street address 513 Parnassus
City San Francisco
State/province California
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (10)
GSM4942396 Myometrim-55_12640
GSM4942397 Myometrium-55_11564
GSM4942398 Myometrium-55.11911
Relations
BioProject PRJNA680734
SRA SRP294127

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162122_RAW.tar 233.1 Mb (http)(custom) TAR (of MTX, TAR, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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