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Series GSE163331 Query DataSets for GSE163331
Status Public on May 04, 2022
Title GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Methylation profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35508708, 36788249
Submission date Dec 16, 2020
Last update date Jun 01, 2023
Contact name Takahiro Suzuki
E-mail(s) takahiro.suzuki.aa@riken.jp
Phone 81-45-503-9222
Organization name RIKEN
Department Center for Integrative Medical Sciences
Lab Laboratory for Cellular Function Conversion Technologies
Street address 1-7-22 Suehiro-cho, Tsurumi-ku
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL21145 Infinium MethylationEPIC
Samples (68)
GSM4977110 in vitro induced definitive endoderm 0h
GSM4977111 in vitro induced definitive endoderm 48h
GSM4977112 in vitro induced definitive endoderm 54h
This SuperSeries is composed of the following SubSeries:
GSE163322 GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation (DE)
GSE163324 GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation (HEP)
GSE163327 GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation (DE ATAC-Seq)
Relations
BioProject PRJNA685758

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163331_RAW.tar 616.0 Mb (http)(custom) TAR (of BED, IDAT)
SRA Run SelectorHelp
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