|
| Status |
Public on Jan 10, 2022 |
| Title |
Single nucleus pituitary transcriptomic and epigenetic landscape reveals human stem cell heterogeneity with diverse regulatory mechanisms (snATAC-seq) |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Single nucleus pituitary transcriptomic and epigenetic landscape reveals human stem cell heterogeneity with diverse regulatory mechanisms
|
| |
|
| Overall design |
Single nucleus chromatin accessibility profiling of post-mortem human pituitaries by single nuclei ATAC-seq, using Illumina
|
| |
|
| Contributor(s) |
Zhang Z, Zamojski M, Smith GR, Willis TL, Yianni V, Mendelev N, Pincas H, Seenarine N, Amper MS, Vasoya M, Nair VD, Turgeon JL, Bernard DJ, Troyanskaya OG, Andoniadou CL, Sealfon SC, Ruf-Zamojski F |
| Citation(s) |
35263594, 35693209 |
| Submission date |
Jun 18, 2021 |
| Last update date |
Aug 12, 2022 |
| Contact name |
Michel A Zamojski |
| E-mail(s) |
michel.zamojski@cshs.org
|
| Organization name |
Cedars-Sinai Medical Center
|
| Department |
Computational BioMedicine
|
| Lab |
Knott
|
| Street address |
8687 Melrose Ave
|
| City |
West Hollywood |
| State/province |
CA |
| ZIP/Postal code |
90069 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (7)
|
| GSM5391765 |
Sample 4-A: Pit_Pedia_HM1_fragm_snATAC |
| GSM5391766 |
Sample 5-A: Pit_Adult_HM2_fragm_snATAC |
| GSM5391767 |
Sample 6-A: Pit_Aged_HM3_fragm_snATAC |
| GSM5391768 |
Sample 1P-A: Pit_Pedia_HF1P_pulver_snATAC |
|
| This SubSeries is part of SuperSeries: |
| GSE178454 |
Single nucleus pituitary transcriptomic and epigenetic landscape reveals human stem cell heterogeneity with diverse regulatory mechanisms |
|
| Relations |
| BioProject |
PRJNA739141 |
| SRA |
SRP324613 |
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