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Series GSE196638 Query DataSets for GSE196638
Status Public on Feb 13, 2023
Title Single-cell RNAseq of the human normal and emphysema lung
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To study emphysema, we conduct single-cell RNAseq of the human healthy and emphysema lung using 10X genomics scRNAseq technique.
 
Overall design Adult human lung cells were sorted from the distal fragments. Dead cells were excluded using DAPI negative selection.
Web link https://doi.org/10.1016/j.immuni.2023.01.032
 
Contributor(s) Wang C, Peng T
Citation(s) 36822205
Submission date Feb 13, 2022
Last update date Feb 27, 2023
Contact name Tien Peng
E-mail(s) tien.peng@ucsf.edu
Organization name University of California San Francisco
Department Department of Pulmonary Medicine
Lab Tien Peng Lab
Street address 513 Parnassus Ave, Health Sciences East 1350
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (6)
GSM5897133 normal human lung cells [NL_1]
GSM5897134 normal human lung cells [NL_2]
GSM5897135 normal human lung cells [NL_3]
Relations
BioProject PRJNA806657

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196638_RAW.tar 526.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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