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Series GSE210189 Query DataSets for GSE210189
Status Public on Aug 02, 2022
Title HUVEC cell transcriptome response to Zaire Ebola virus (EBOV) and mutant lacking the mucin domain (deltamucin-EBOV)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The purpose is to obtain samples for mRNA analysis in HUV-EC-C cells, a human endothelial cell line isolated from the vein of the umbilical cord, using the following viruses obtained by reverse genetics: Zaire Ebola virus wild-type in the ΔVP30 background (deltaVP30-WT) and mutant lacking the mucin domain (deltaVP30-deltamucin).
 
Overall design HUVEC cells were infected with a MOI=500 adenovirus VP30 overnight. 24 hours post adeno-infection cells were either Mock, deltaVP30-WT-EBOV (MOI=10), or deltaVP30-delta-mucin-EBOV (MOI=10) infected. Infected samples were collected in quintuplet; time-matched mocks were collected in quintuplet in parallel with infected samples. Time points: 0, 8, 24, 48, and 72 h post-infection.
 
Contributor(s) Westhoff Smith D, Heller N, Waters KM, Eisfeld AJ, Kawaoka Y
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Submission date Aug 01, 2022
Last update date Aug 04, 2022
Contact name Natalie Heller
E-mail(s) natalie.heller@pnnl.gov
Organization name PNNL
Street address 902 Battelle Blvd.
City Richland
ZIP/Postal code 99354
Country USA
 
Platforms (1)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
Samples (75)
GSM6423091 EHUVEC_deltaVP30deltamucin_0h_1_1
GSM6423092 EHUVEC_deltaVP30deltamucin_0h_2_2
GSM6423093 EHUVEC_deltaVP30deltamucin_0h_3_3
This SubSeries is part of SuperSeries:
GSE65575 Modeling Host Responses to Understand Severe Human Virus Infections
Relations
BioProject PRJNA864745

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210189_RAW.tar 159.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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