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| Status |
Public on Sep 30, 2015 |
| Title |
Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies |
| Organisms |
Polistes canadensis; Dinoponera quadriceps |
| Experiment type |
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
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| Summary |
First brain methylome and transcriptomic data of two simple eusocial insects: Polistes canadensis paper wasp and Dinoponera quadriceps dinosaur ant
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| Overall design |
Bisulfite and RNA sequencing method on single brain
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| Contributor(s) |
Patalano S, Vlasova AV, Wyatt C, Ewels PA, Camara F, Ferreira PG, Asher C, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzales I, Minoche AE, Krueger F, Lowy Gallego E, Marcet-Houben M, Rodriguez-Ales JL, Nascimiento F, Balsubramanian S, Gabaldon T, Tarver TE, Andrews S, Himmelbauer H, Hughes WH, Guigó R, Reik W, Sumner S |
| Citation(s) |
26483466 |
| Submission date |
Jul 17, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Felix Krueger |
| E-mail(s) |
fkrueger@altoslabs.com
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| Organization name |
Altos Labs
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| Department |
Bioinformatics
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| Street address |
Granta Park
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| City |
Cambridge |
| ZIP/Postal code |
CB21 6GP |
| Country |
United Kingdom |
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| Platforms (2) |
| GPL18973 |
Illumina HiSeq 2000 (Polistes canadensis) |
| GPL18974 |
Illumina HiSeq 2000 (Dinoponera quadriceps) |
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| Samples (37)
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| Relations |
| BioProject |
PRJNA255520 |
| SRA |
SRP044613 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE59525_RAW.tar |
7.7 Gb |
(http)(custom) |
TAR (of TXT) |
| GSE59525_RPKM_Dqua.txt.gz |
1.4 Mb |
(ftp)(http) |
TXT |
| GSE59525_RPKM_Pcan.txt.gz |
817.5 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Processed data are available on Series record |
| Processed data provided as supplementary file |
| Raw data are available in SRA |
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