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| Status |
Public on May 02, 2015 |
| Title |
caArray_notte-00422: Molecular Dissection of Colon Cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
RNA expression data was generated as part of a colon cancer study. Samples were obtained from patients, including primary colon cancer, polyps, metastases, and matched normal mucosa (obtained from the margins of the resection). The RNA was extracted from tissue samples obtained from resections and hybridized to Affymetrix HG-U133 arrays. RNA expression data was also obtained for a few cell lines.
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| Overall design |
notte-00422
Assay Type: Gene Expression
Provider: Affymetrix
Array Designs: HG-U133A
Organism: Homo sapiens (ncbitax)
Material Types: cell, total_RNA, synthetic_RNA, organism_part, whole_organism
Disease States: colon cancer, colon polyp, Colon Carcinoma, colon adenocarcinoma, breast cancer, Normal, Prostate Adenocarcinoma
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| Citation(s) |
19359472, 12801868, 17699774, 17044051, 16489013, 18483253, 15722375 |
| Submission date |
May 01, 2015 |
| Last update date |
Aug 10, 2018 |
| Contact name |
Mervi Heiskanen |
| E-mail(s) |
mervi.heiskanen@nih.gov
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| Phone |
2402765175
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| Organization name |
NCI
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| Department |
CBIIT
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| Street address |
9609 Medical Center Drive, 1W378
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| City |
Rockville |
| State/province |
MD |
| ZIP/Postal code |
20850 |
| Country |
USA |
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| Platforms (1) |
| GPL96 |
[HG-U133A] Affymetrix Human Genome U133A Array |
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| Samples (390)
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| Relations |
| BioProject |
PRJNA282808 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE68468_RAW.tar |
3.5 Gb |
(http)(custom) |
TAR (of CEL, CHP) |
| GSE68468_caArray_notte-00422_magetab.tar.gz |
22.8 Kb |
(ftp)(http) |
TAR |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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