|
| Status |
Public on Jan 05, 2016 |
| Title |
Single-cell transcriptomics reveals unique features of human pancreatic islet cell subtypes |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the single-cell RNA-seq based identification of 6 known human islet cell types (alpha cells, beta cells, delta cells, pp cells, acinar cells and duct cells) based on the expression of known marker genes. We further assess cell type specific gene expression and suggest novel marker genes for several cell types.
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| |
|
| Overall design |
Transcriptional dissection of human pancreatic islets of one donor using single-cell RNA-seq
|
| |
|
| Contributor(s) |
Li J, Klughammer J, Farlik M, Penz T, Spittler A, Barbieux C, Berishvili E, Bock C, Kubicek S |
| Citation(s) |
26691212, 27916275 |
| Submission date |
Oct 05, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Christoph Bock |
| E-mail(s) |
cbock@cemm.oeaw.ac.at
|
| Organization name |
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
|
| Street address |
Lazarettgasse 14
|
| City |
Vienna |
| ZIP/Postal code |
1090 |
| Country |
Austria |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (72)
|
|
| Relations |
| BioProject |
PRJNA297774 |
| SRA |
SRP064464 |
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