Arabidopsis thaliana (thale cress): AT5G48940
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Entry
AT5G48940 CDS
T00041
Name
(RefSeq) Leucine-rich repeat transmembrane protein kinase family protein
Organism
ath
Arabidopsis thaliana (thale cress)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
PK_Tyr_Ser-Thr
Pkinase
LRR_4
LRR_8
LRRNT_2
Kinase-like
Motif
Other DBs
NCBI-GeneID:
834952
NCBI-ProteinID:
NP_199705
TAIR:
AT5G48940
UniProt:
C0LGV1
A0A5S9YCZ2
LinkDB
All DBs
Position
5:19839663..19843859
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AA seq
1135 aa
AA seq
DB search
MSLQMPIPRKKALTVSHFSITLSLFLAFFISSTSASTNEVSALISWLHSSNSPPPSVFSG
WNPSDSDPCQWPYITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTG
AISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSL
KNLEIFDNYLSENLPLELGKISTLESIRAGGNSELSGKIPEEIGNCRNLKVLGLAATKIS
GSLPVSLGQLSKLQSLSVYSTMLSGEIPKELGNCSELINLFLYDNDLSGTLPKELGKLQN
LEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSNNIT
GSIPSILSNCTKLVQFQIDANQISGLIPPEIGLLKELNIFLGWQNKLEGNIPDELAGCQN
LQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRIT
GEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTK
LQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSLGHCTNLQLLDLSSNNIS
GTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDLSALSGLEN
LVSLNISHNRFSGYLPDSKVFRQLIGAEMEGNNGLCSKGFRSCFVSNSSQLTTQRGVHSH
RLRIAIGLLISVTAVLAVLGVLAVIRAKQMIRDDNDSETGENLWTWQFTPFQKLNFTVEH
VLKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEV
KTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILG
AAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGS
YGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVI
DQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEICQEREESMKVDGCS
GSCNNGRERGKDDSTSSVMQQTAKYLRSSSTSFSASSLLYSSSSSATSNVRPNLK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcaaatgccgattccaagaaaaaaagccttaactgtttctcatttttccatt
acattgtctctgtttttagctttcttcatctcctcgacctctgcatcaaccaatgaagtc
tcagctttgatttcttggcttcacagctcgaactcgccgccaccgtcagtcttctccggc
tggaatccttctgattctgacccatgtcaatggccttacattacttgttcctcctcagac
aacaaactcgttacagagatcaatgtcgtctctgttcagttagctttacctttccctcct
aacatttcttcgtttacttcacttcagaaactcgttatctccaacactaatctcaccgga
gctatatcttctgagatcggagattgttcggagcttatagttatcgatttaagctcaaat
agtcttgttggtgaaataccttcgagtctagggaagctcaagaatcttcaagaactttgt
ttaaactccaatggcctcacaggaaagatcccaccggaactcggcgactgcgttagcctc
aagaatcttgagattttcgataactacttatccgagaatctcccgttggagctcggaaag
atctcgactcttgagagcataagagccggaggaaactcagagctttcagggaagatcccg
gaggagatcggaaactgtaggaatctcaaggtcttagggttagcagcaacgaaaatatcc
ggttctttacctgtttcgttgggtcaactaagcaagctccagtctttatctgtctattct
acaatgctctcaggtgagatccctaaagagcttggaaactgctctgaacttatcaatctg
tttctatacgacaatgacttgtccggcacgcttccaaaagaactaggaaagcttcaaaac
ctagagaagatgcttctatggcagaataatctccacggacctatccctgaggagattgga
ttcatgaaaagcttaaacgccattgatctctctatgaactatttctcaggaaccatccct
aaatcgttcggtaacttgtcgaatctccaagagcttatgcttagcagcaacaacatcacc
gggtcaataccttcgattctaagtaactgcacaaagcttgttcagttccagattgacgcc
aatcagatttcaggtttgattccaccagagattggattgcttaaggagctcaacatcttc
ttgggatggcagaataagctagaagggaatattccggacgagttagctggttgtcagaat
cttcaagctcttgacttgtcacagaattatctcaccggatcattacctgcaggtttgttt
cagcttcgtaatctgactaagctcttgcttatatctaatgccatctccggtgttatccca
ctggagatcgggaactgcacttcgcttgtcagattaaggcttgtcaataacagaatcacc
ggagaaatccctaaaggtattggatttcttcagaaccttagcttcctcgacttgtctgag
aacaatctctccggtccagttcctttggagataagtaattgtagacaactccagatgctt
aacttgagcaacaacactcttcaaggttatcttcctctgtctttatcatcgttaacaaag
cttcaagtacttgatgtctcttccaatgacttgactggcaagatacctgatagtctaggt
catctcatttcactcaaccggctcattctaagtaagaattctttcaatggagaaatccct
tcgtctctcggtcactgcacgaatcttcagcttcttgatctcagcagtaataacatctct
ggaactataccggaggagctttttgacatccaagatctagacattgcgttaaacttgagc
tggaattcattagatggctttatcccggaaaggatttccgcgcttaaccgattatccgtg
ctcgatatttcgcataacatgctttcaggcgacctttctgcgctgtccggtctagaaaac
ttggtttctctgaacatctctcataacagattctcaggttatcttccagatagtaaagtg
tttagacagctgataggagcagagatggaaggaaacaatggactctgttccaaaggtttc
aggtcttgctttgtaagtaacagttcacagttaactacacagcgtggtgtgcactcacat
agactcaggatagccattggattgctaatcagcgtgacagcggttctagcggtattaggc
gtgttggcggttatacgagctaaacaaatgattcgagatgataacgattcagagactgga
gaaaatctatggacatggcaattcacaccttttcagaaactcaacttcacagtcgaacat
gtactcaagtgtttggtagaaggtaatgttatagggaaaggttgctccgggatagtgtac
aaagctgaaatgcctaacagagaagtcatcgcggtgaaaaagctctggccagtgacagta
cctaatctgaatgagaaaactaagtcatcaggagttcgagactcattctcagctgaagta
aaaacacttggatcgatcagacacaagaacattgtacgcttcttgggatgttgttggaac
aagaacactagacttcttatgtatgattatatgtcaaatgggagtttgggaagtttgctt
cacgaaaggagcggtgtatgtagcttaggatgggaagtgaggtacaagattatacttggt
gcagctcagggtttggcttacttgcaccatgactgtgttcctcccattgttcatagagac
atcaaggcaaataatattctgattggccctgattttgaaccttacattggagatttcgga
ctcgctaagcttgttgatgatggcgactttgctcgttcttccaacaccattgctggttcc
tatggttacatagctccagaatacggatactcaatgaagataacagagaaaagcgacgtg
tacagctatggagtcgtagtgctcgaggtactaacgggtaagcaaccaatcgatccaacg
ataccagatggactccacatagtggactgggtcaagaaaatcagagacatacaagtaatc
gaccaaggactacaagcaagaccagagtcagaggttgaagagatgatgcaaacgctagga
gtcgcgcttttatgcattaatccaatacccgaagacaggcctacaatgaaagatgtggct
gctatgcttagtgagatatgtcaagagagagaggaatcgatgaaagttgatggttgctcg
ggaagttgtaacaatggaagagaacgtggcaaagatgattcgacttcatcggttatgcaa
caaacggctaagtatttgagaagtagtagcacgagtttctctgcgtcttctttgctttac
tcttcttcttcttctgctacttctaatgttagaccaaatcttaaataa
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integrated database retrieval system
