Caenorhabditis elegans (nematode): CELE_M03A1.1
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Entry
CELE_M03A1.1 CDS
T00019
Symbol
vab-1
Name
(RefSeq) Ephrin receptor 1
KO
K05110
Eph receptor B1 [EC:
2.7.10.1
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CELE_M03A1.1 (vab-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cel01001
]
CELE_M03A1.1 (vab-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
CELE_M03A1.1 (vab-1)
Protein kinases [BR:
cel01001
]
Receptor tyrosine kinases (RTK)
EPH family [OT]
CELE_M03A1.1 (vab-1)
Cytokine receptors [BR:
cel04050
]
Receptor tyrosine kinase
RTK class VIII (EPH receptor family)
CELE_M03A1.1 (vab-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ephrin_lbd
fn3
EphA2_TM
Pur_ac_phosph_N
Ephrin_rec_like
TMEM154
CRLF2-like_D2
Kdo
Kinase-like
COX2_TM
Motif
Other DBs
NCBI-GeneID:
173794
NCBI-ProteinID:
NP_494807
WormBase:
WBGene00006868
UniProt:
O61460
LinkDB
All DBs
Position
II:4572000..4590970
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AA seq
1117 aa
AA seq
DB search
MRLYNSRILNPHQSIFILVLQCLITIVTSHQEVLFDLSKVGSDLKWDQVSLRHDRDDVWM
EETWRNPAATDEKHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIYIELLFNTRDCDA
YLNPKSCKETFSVYLKQFKTSRPGSTKIEKERFSEDIDNWKNIGRLARSNSNMTTETLGM
EIDSDTKTIRIAFEEQGICLSLLNVKIYYRICDEFTDQLVYFRPQVTGPKETDMVRMNGS
CIPNASKKIPGVDLIGLCMSTGSGIKTSGECVCDSGYSQIADSNGARCESCPTNTYKPKG
QSLCKSCPSNSISSEAASSCRCLNGYFRAEDELISMPCTQPPSRPIKLVANAITATSTRL
SWNEPSSLGGRPEIWYEVKCSGRGECGTVVMTPGDKKLSTRSVQINGLRPSSDYTFLVFA
KNKVSAQFPEFSEKNAVIDIRTRSEEEDVPPVSHLRVDASQSDGITIAWSVSDSDVSDFE
VEVRPAIVKKRTFETRHVNMTYTTFIGLNPETVYQFRVRIRDDLRWSQPISYQLGRGLMS
SPSSNEVEESQFLNQTGSALLIIIALILIVIAVALCMIVVQKKSKNRKQMSDLDVLDTYK
QDSMTPDYHTTSRHHHHQGNLPATLHEQLRSTTKLNAPLIPSFGSPISQPPPYYGGVHPN
SGKYKTYVDPTTYEDPYQALIEFTFDISPNDVFITQVIGGGEFGDVCLGGLSKNSPAAAK
WSVSNTTMGRGGGGGGYESEPYETVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRL
IGVVTSAEPVMIVAEYMANGSLDQFLRNTDQRGEKVHWEKITEMLYGIASGMKYLTDMGY
VHRDLAARNVLLDMELRCKIADFGLSRGVRSEGSSVEPEYTTNGGKIPVRWTAPEAITHR
KFTPSSDVWSFGVVIWEVCSFGERPYWDWTNQKVISEVMIGYRLPPPMDCPMGLYRIAQW
CWKMERHERPTFTQLLATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTP
PSSAAPMPSLDDFLRQIGLNHVYGQLVSNNIHSVSDLANTSHLDLLAYGLMSAECSTVRD
GLNGRISGSPPGSSGTIHATTRGTRTTRPPREEGFFV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgtacaattcgcggattctaaatccccaccaatcgatatttattctggttcta
cagtgtctgatcacaatcgtcacatcacatcaagaagttctcttcgacttgtccaaagtt
ggatcggatctaaaatgggaccaagtctcgctgcgacacgatcgagacgatgtgtggatg
gaagaaacttggcgaaatccagcggcgacagacgagaagcacgccaatcagagagcctac
gtcacgtgtaattatgatatgataaatccgagcaattggttgttcagtcattttatcgag
gttaaaactgcgaggagaatctacatcgaactgctcttcaacacacgtgactgtgatgcc
tacttgaatcccaaatcctgtaaagaaacattctccgtgtacctgaaacaattcaaaacg
tctcgacccggatctacaaaaatcgagaaggaacgattttcggaggatatcgataattgg
aagaatattggacggttggctcgaagtaattcaaatatgacgactgaaactcttggaatg
gaaatcgactcggacacgaaaacgattagaattgcattcgaagagcaaggaatttgtctt
tcacttttaaatgtcaagatttactaccgaatatgcgacgaattcaccgatcaacttgtc
tacttccgaccacaagttaccgggccaaaagagactgatatggtccgaatgaatggttcg
tgtattccgaatgcgtcgaaaaagatcccgggagtcgatttgatcggattgtgtatgtcg
actggaagtggtatcaaaacgtctggcgagtgcgtttgtgatagtggatattctcaaatt
gccgattcgaatggagctcggtgtgagagctgtccaacgaacacgtacaaaccaaaaggc
caatccctttgcaaatcgtgtccatccaattcgatatcttcggaagctgccagctcttgt
cgctgtcttaatggttatttcagagcagaagatgagctcatttcgatgccatgcactcaa
ccaccatcccgaccgataaaactagtggccaacgcgatcaccgccacgtcgacccgtctc
tcttggaatgagccgagcagtctgggaggtcgcccagaaatttggtatgaagtgaaatgt
tcgggacgaggagagtgtggaacagtagttatgacacctggtgataagaaactatcgaca
agatctgtgcaaatcaatgggctcagaccatcatccgactacacttttttggtgttcgcc
aagaataaggtgtctgctcagtttcccgagtttagtgagaagaatgcggttattgatatc
agaacacgatcagaagaggaagatgttccacctgtgtcacatttaagagttgatgcttct
caatccgatggaatcaccatcgcctggagtgtttcggattctgatgtttcggattttgaa
gtggaagttcgtccggcaattgtgaagaagagaactttcgaaactcgacatgttaacatg
acatataccacttttattggattaaatccagaaacggtatatcaattccgagtacgaatt
cgagatgatcttcgttggagtcaaccgatcagttatcaacttggacgaggattgatgagc
tctccgtcgtcgaatgaagtcgaagaatctcagtttttgaatcaaactggatctgcactt
ttaatcattatagctttgatacttattgtcattgcagttgctctttgtatgattgtggtg
cagaaaaagtcgaagaatcggaaacagatgagcgatttggatgttttggacacttataaa
caagattcaatgacacctgactatcatacaacatctcgacatcatcatcatcagggaaat
ctaccggctactctgcacgaacaacttcgatcgactacaaagttgaatgctccactaatt
ccatcatttggatctccaatctcccaaccaccaccatactacggtggagtacatccgaat
agtggaaaatataagacatatgtggatccaacaacatatgaagatccatatcaagcactc
atcgaattcacattcgacatttcaccaaacgacgtcttcattactcaggttattggtgga
ggagaattcggcgatgtctgcctgggtggtctgtcgaaaaactcgcctgcggccgcgaaa
tggagtgtttcaaatacaacaatgggacgaggaggaggtggtggaggatacgaatcagaa
ccatatgagacggttgccatcaaaactctgaaatctggaagcagtgcgaaagcgaaagcc
gaatttttgacggaagcaaccatcatgggacaattctcacatccaaatgtgattcggctc
attggagttgtgacgtcagcggagccagtgatgattgtggccgagtacatggcaaatgga
tctttggatcaattccttcggaatacggatcaacgaggagagaaggttcattgggagaag
atcactgaaatgttgtatggaattgcttctggaatgaagtatttgacagatatgggatat
gtgcacagagatctcgccgcccgaaacgttcttctcgacatggagcttcgctgcaaaatc
gctgattttggactttcccgtggtgtcagaagtgaaggatcttctgtcgaacccgaatac
actacaaatggcggaaagattccagtcagatggactgctccagaagcaattacccatcga
aagttcactccatcctctgatgtctggtcgttcggagttgtgatctgggaagtgtgttca
ttcggtgaacgaccatattgggattggacgaatcagaaggtgatcagcgaagtgatgatc
ggctatcgactaccaccaccgatggattgtccgatgggattgtatcggatcgcccagtgg
tgttggaagatggagcgacacgagcgtccgacgttcacacagcttctcgccacattccac
aagtacatcctgcagccgacacttattgagcatgatcctggagagcttccgcgacgggtt
cagagtcaatctgccctgaatacctatggatctgtgaatgtcggagtagttccaacccca
ccatcgtcggctgctccgatgccatcgctcgacgattttctccgtcaaattggcctaaat
catgtctacggacaactcgtgtcgaataacattcactctgtgagtgacttggccaacacg
tctcacttggatcttcttgcctatggtctcatgtccgcggagtgctcgaccgttcgggat
ggactcaacggacgcatcagtggctcaccaccgggctcttctggaacaatccacgcgacg
acacgtggaacaagaacgacgagaccgcctcgagaagagggattctttgtttag
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