KEGG   PATHWAY: cal04136
Entry
cal04136                    Pathway                                
Name
Autophagy - other - Candida albicans
Description
Autophagy is a degradative pathway for the removal of cytoplasmic materials in eukaryotic cells, and is characterized by the formation of a double-membrane structure called the autophagosome, either in a housekeeping capacity or during stress and senescence. The process of autophagy could be divided into several stages: induction, vesicle nucleation, elongation and closure, and fusion and digestion. Most essential autophagic machineries are conserved throughout eukaryotes (see map04140 for animals and map04138 for fungi). This map is for other eukaryotes including plants and protists, where autophagy related genes (ATGs) play similar roles in the life cycle. However, autophagy has been relatively less studied in lower eukaryotes.
Class
Cellular Processes; Transport and catabolism
Pathway map
cal04136  Autophagy - other
cal04136

Other DBs
GO: 0006914
Organism
Candida albicans [GN:cal]
Gene
CAALFM_C105460WA  KOG1; ubiquitin-binding TORC1 subunit [KO:K07204]
CAALFM_C207330WA  TOR1; phosphatidylinositol kinase-related protein kinase [KO:K07203] [EC:2.7.11.1]
CAALFM_CR06090WA  CaO19.3862; TOR complex subunit [KO:K08266]
CAALFM_C404450CA  ATG1; serine/threonine protein kinase [KO:K08269] [EC:2.7.11.1]
CAALFM_CR02910WA  CaO19.2848; serine/threonine protein kinase regulatory subunit [KO:K08331]
CAALFM_C112150CA  CaO19.5249; hypothetical protein [KO:K19730]
CAALFM_C401790WA  CaO19.4614; autophagy protein [KO:K08330]
CAALFM_C401670CA  CaO19.4626; hypothetical protein [KO:K17606]
CAALFM_C301600WA  PPH21; phosphoprotein phosphatase 2A catalytic subunit [KO:K04382] [EC:3.1.3.16]
CAALFM_C305040CA  ATG9; autophagy protein [KO:K17907]
CAALFM_C206010WA  SPO72; Spo72p [KO:K17906]
CAALFM_C100430WA  CaO19.6064; phosphoinositide binding protein [KO:K17908]
CAALFM_C103330CA  CaO19.3030; hypothetical protein [KO:K17908]
CAALFM_C402670WA  CaO19.2733; beclin 1 [KO:K08334]
CAALFM_C106680WA  VPS34; phosphatidylinositol 3-kinase [KO:K00914] [EC:2.7.1.137]
CAALFM_C601190CA  VPS15; ubiquitin-binding serine/threonine protein kinase [KO:K08333] [EC:2.7.11.1]
CAALFM_C113950CA  CaO19.5033; hypothetical protein [KO:K08336]
CAALFM_C102200CA  CaO19.3677; hypothetical protein [KO:K08339]
CAALFM_CR06730WA  APG7; Apg7p [KO:K08337]
CAALFM_C100860WA  CaO19.6020; hypothetical protein [KO:K08343]
CAALFM_C105700WA  AUT7; ubiquitin-like protein [KO:K08341]
CAALFM_CR03220CA  CaO19.2401; cysteine protease [KO:K08342] [EC:3.4.22.-]
Compound
C00350  Phosphatidylethanolamine
C01194  1-Phosphatidyl-D-myo-inositol
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Duszenko M, Ginger ML, Brennand A, Gualdron-Lopez M, Colombo MI, Coombs GH, Coppens I, Jayabalasingham B, Langsley G, de Castro SL, Menna-Barreto R, Mottram JC, Navarro M, Rigden DJ, Romano PS, Stoka V, Turk B, Michels PA
  Title
Autophagy in protists.
  Journal
Autophagy 7:127-58 (2011)
DOI:10.4161/auto.7.2.13310
Reference
  Authors
Avin-Wittenberg T, Honig A, Galili G
  Title
Variations on a theme: plant autophagy in comparison to yeast and mammals.
  Journal
Protoplasma 249:285-99 (2012)
DOI:10.1007/s00709-011-0296-z
Reference
  Authors
Liu Y, Bassham DC
  Title
Autophagy: pathways for self-eating in plant cells.
  Journal
Annu Rev Plant Biol 63:215-37 (2012)
DOI:10.1146/annurev-arplant-042811-105441
Reference
  Authors
Yoshimoto K
  Title
Beginning to understand autophagy, an intracellular self-degradation system in plants.
  Journal
Plant Cell Physiol 53:1355-65 (2012)
DOI:10.1093/pcp/pcs099
Reference
  Authors
Li F, Chung T, Vierstra RD
  Title
AUTOPHAGY-RELATED11 plays a critical role in general autophagy- and senescence-induced mitophagy in Arabidopsis.
  Journal
Plant Cell 26:788-807 (2014)
DOI:10.1105/tpc.113.120014
Reference
  Authors
Michaeli S, Galili G, Genschik P, Fernie AR, Avin-Wittenberg T
  Title
Autophagy in Plants--What's New on the Menu?
  Journal
Trends Plant Sci 21:134-44 (2016)
DOI:10.1016/j.tplants.2015.10.008
Reference
  Authors
Yang X, Bassham DC
  Title
New Insight into the Mechanism and Function of Autophagy in Plant Cells.
  Journal
Int Rev Cell Mol Biol 320:1-40 (2015)
DOI:10.1016/bs.ircmb.2015.07.005
KO pathway
ko04136   
LinkDB

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