KEGG   PATHWAY: dha04136
Entry
dha04136                    Pathway                                
Name
Autophagy - other - Debaryomyces hansenii
Description
Autophagy is a degradative pathway for the removal of cytoplasmic materials in eukaryotic cells, and is characterized by the formation of a double-membrane structure called the autophagosome, either in a housekeeping capacity or during stress and senescence. The process of autophagy could be divided into several stages: induction, vesicle nucleation, elongation and closure, and fusion and digestion. Most essential autophagic machineries are conserved throughout eukaryotes (see map04140 for animals and map04138 for fungi). This map is for other eukaryotes including plants and protists, where autophagy related genes (ATGs) play similar roles in the life cycle. However, autophagy has been relatively less studied in lower eukaryotes.
Class
Cellular Processes; Transport and catabolism
Pathway map
dha04136  Autophagy - other
dha04136

Other DBs
GO: 0006914
Organism
Debaryomyces hansenii [GN:dha]
Gene
DEHA2E07810g  DEHA2E07810p [KO:K07204]
DEHA2F23452g  DEHA2F23452p [KO:K07203] [EC:2.7.11.1]
DEHA2G10824g  DEHA2G10824p [KO:K08266]
DEHA2D12452g  DEHA2D12452p [KO:K08269] [EC:2.7.11.1]
DEHA2E09020g  DEHA2E09020p [KO:K08331]
DEHA2B08580g  DEHA2B08580p [KO:K19730]
DEHA2D17886g  DEHA2D17886p [KO:K08330]
DEHA2G02508g  DEHA2G02508p [KO:K17606]
DEHA2D15290g  DEHA2D15290p [KO:K04382] [EC:3.1.3.16]
DEHA2B14168g  DEHA2B14168p [KO:K17907]
DEHA2C15268g  DEHA2C15268p [KO:K17906]
DEHA2G09438g  DEHA2G09438p [KO:K17908]
DEHA2G12364g  DEHA2G12364p [KO:K17908]
DEHA2E16214g  DEHA2E16214p [KO:K08334]
DEHA2G13288g  DEHA2G13288p [KO:K00914] [EC:2.7.1.137]
DEHA2F15466g  DEHA2F15466p [KO:K08333] [EC:2.7.11.1]
DEHA2C14036g  DEHA2C14036p [KO:K08336]
DEHA2C02332g  DEHA2C02332p [KO:K08339]
DEHA2G23518g  DEHA2G23518p [KO:K08337]
DEHA2D09900g  DEHA2D09900p [KO:K08343]
DEHA2D03960g  DEHA2D03960p [KO:K08341]
DEHA2A07832g  DEHA2A07832p [KO:K08342] [EC:3.4.22.-]
Compound
C00350  Phosphatidylethanolamine
C01194  1-Phosphatidyl-D-myo-inositol
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Duszenko M, Ginger ML, Brennand A, Gualdron-Lopez M, Colombo MI, Coombs GH, Coppens I, Jayabalasingham B, Langsley G, de Castro SL, Menna-Barreto R, Mottram JC, Navarro M, Rigden DJ, Romano PS, Stoka V, Turk B, Michels PA
  Title
Autophagy in protists.
  Journal
Autophagy 7:127-58 (2011)
DOI:10.4161/auto.7.2.13310
Reference
  Authors
Avin-Wittenberg T, Honig A, Galili G
  Title
Variations on a theme: plant autophagy in comparison to yeast and mammals.
  Journal
Protoplasma 249:285-99 (2012)
DOI:10.1007/s00709-011-0296-z
Reference
  Authors
Liu Y, Bassham DC
  Title
Autophagy: pathways for self-eating in plant cells.
  Journal
Annu Rev Plant Biol 63:215-37 (2012)
DOI:10.1146/annurev-arplant-042811-105441
Reference
  Authors
Yoshimoto K
  Title
Beginning to understand autophagy, an intracellular self-degradation system in plants.
  Journal
Plant Cell Physiol 53:1355-65 (2012)
DOI:10.1093/pcp/pcs099
Reference
  Authors
Li F, Chung T, Vierstra RD
  Title
AUTOPHAGY-RELATED11 plays a critical role in general autophagy- and senescence-induced mitophagy in Arabidopsis.
  Journal
Plant Cell 26:788-807 (2014)
DOI:10.1105/tpc.113.120014
Reference
  Authors
Michaeli S, Galili G, Genschik P, Fernie AR, Avin-Wittenberg T
  Title
Autophagy in Plants--What's New on the Menu?
  Journal
Trends Plant Sci 21:134-44 (2016)
DOI:10.1016/j.tplants.2015.10.008
Reference
  Authors
Yang X, Bassham DC
  Title
New Insight into the Mechanism and Function of Autophagy in Plant Cells.
  Journal
Int Rev Cell Mol Biol 320:1-40 (2015)
DOI:10.1016/bs.ircmb.2015.07.005
KO pathway
ko04136   
LinkDB

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