Entry
Name
Focal adhesion - Danio rerio (zebrafish)
Description
Cell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the cell-extracellular matrix contact points, specialized structures are formed and termed focal adhesions, where bundles of actin filaments are anchored to transmembrane receptors of the integrin family through a multi-molecular complex of junctional plaque proteins. Some of the constituents of focal adhesions participate in the structural link between membrane receptors and the actin cytoskeleton, while others are signalling molecules, including different protein kinases and phosphatases, their substrates, and various adapter proteins. Integrin signaling is dependent upon the non-receptor tyrosine kinase activities of the FAK and src proteins as well as the adaptor protein functions of FAK, src and Shc to initiate downstream signaling events. These signalling events culminate in reorganization of the actin cytoskeleton; a prerequisite for changes in cell shape and motility, and gene expression. Similar morphological alterations and modulation of gene expression are initiated by the binding of growth factors to their respective receptors, emphasizing the considerable crosstalk between adhesion- and growth factor-mediated signalling.
Class
Cellular Processes; Cellular community - eukaryotes
BRITE hierarchy
Pathway map
Other DBs
Organism
Danio rerio (zebrafish) [GN:
dre ]
Gene
100000252 pik3r3b; phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [KO:K02649 ]
100002263 pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
100318854 comp; cartilage oligomeric matrix protein isoform 1 precursor [KO:K04659 ]
114433 igf1; insulin-like growth factor I precursor [KO:K05459 ]
286830 lamb1a; laminin subunit beta-1a precursor [KO:K05636 ]
30429 mylpfa; myosin regulatory light chain 2, skeletal muscle isoform A [KO:K12758 ]
30592 myl7; myosin regulatory light chain 2, atrial isoform [KO:K12754 ]
30682 vegfaa; vascular endothelial growth factor A-A isoform 1 precursor [KO:K05448 ]
321212 col9a2; collagen alpha-2(IX) chain precursor [KO:K08131 ]
323561 col4a5; collagen alpha-5(IV) chain precursor [KO:K06237 ]
323818 shc1; SHC-transforming protein 1 isoform X3 [KO:K06279 ]
325675 col1a1b; collagen, type I, alpha 1b precursor [KO:K06236 ]
326719 myl12.1; myosin, light chain 12, genome duplicate 1 [KO:K12757 ]
327204 rac1a; ras-related C3 botulinum toxin substrate 1 [KO:K04392 ]
334597 ppp1cbl; protein phosphatase 1, catalytic subunit, beta isoform, like [KO:K06269 ] [EC:3.1.3.16 ]
336471 col1a2; collagen alpha-2(I) chain precursor [KO:K06236 ]
336839 cdc42; cell division control protein 42 homolog isoform 2 [KO:K04393 ]
337084 myl12.2; myosin, light chain 12, genome duplicate 2 [KO:K12757 ]
337158 col1a1a; collagen, type I, alpha 1a precursor [KO:K06236 ]
373107 birc2; baculoviral IAP repeat-containing protein 2 [KO:K16060 ]
378480 pdgfaa; platelet-derived growth factor alpha polypeptide a precursor [KO:K04359 ]
394101 rapgef1b; rap guanine nucleotide exchange factor 1b [KO:K06277 ]
394174 pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922 ] [EC:2.7.1.153 ]
403045 egf; pro-epidermal growth factor isoform 1 precursor [KO:K04357 ]
403049 vegfc; vascular endothelial growth factor C precursor [KO:K05449 ]
404211 pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
406308 grb2b; growth factor receptor-bound protein 2b [KO:K04364 ]
406411 rhoaa; rho-related GTP-binding protein RhoA-A [KO:K04513 ]
406493 myl9b; myosin regulatory light polypeptide 9b [KO:K12755 ]
406548 col9a1b; collagen, type IX, alpha 1b precursor [KO:K08131 ]
406659 rhoac; rho-related GTP-binding protein RhoA-C [KO:K04513 ]
415151 rac2; ras-related C3 botulinum toxin substrate 2 [KO:K07860 ]
415242 rap1aa; RAP1A, member of RAS oncogene family a [KO:K04353 ]
436718 rhocb; rho-related GTP-binding protein RhoA-D [KO:K04513 ]
437027 rac3a; ras-related C3 botulinum toxin substrate 3a [KO:K07861 ]
445393 ppp1r12a; protein phosphatase 1 regulatory subunit 12A [KO:K06270 ]
447930 mylpfb; myosin regulatory light chain 2, skeletal muscle isoform B [KO:K12758 ]
449831 pip5k1ba; phosphatidylinositol-4-phosphate 5-kinase, type I, beta a [KO:K00889 ] [EC:2.7.1.68 ]
493609 grb2a; growth factor receptor-bound protein 2a [KO:K04364 ]
493781 hgfa; hepatocyte growth factor a precursor [KO:K05460 ]
503730 col2a1b; collagen, type II, alpha 1b precursor [KO:K19719 ]
544667 flt1; vascular endothelial growth factor receptor 1 isoform 1 precursor [KO:K05096 ] [EC:2.7.10.1 ]
550487 vaspb; vasodilator-stimulated phosphoprotein isoform X1 [KO:K06274 ]
553337 lamb2l; laminin subunit beta-1 isoform X1 [KO:K06243 ]
553629 pip5k1aa; phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [KO:K00889 ] [EC:2.7.1.68 ]
554268 col4a6; collagen alpha-6(IV) chain isoform X1 [KO:K06237 ]
554270 col4a4; collagen alpha-4(IV) chain isoform X1 [KO:K06237 ]
555805 vaspa; vasodilator stimulated phosphoprotein a [KO:K06274 ]
556413 vav2; guanine nucleotide exchange factor VAV2 isoform X2 [KO:K05730 ]
556605 lamb1b; laminin subunit beta-1b precursor [KO:K05636 ]
556874 col6a3; collagen alpha-3(VI) chain isoform X5 [KO:K06238 ]
557176 pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha [KO:K02649 ]
558154 vegfab; vascular endothelial growth factor Ab isoform 1 precursor [KO:K05448 ]
558635 rapgef1a; rap guanine nucleotide exchange factor 1 [KO:K06277 ]
559145 vav3b; guanine nucleotide exchange factor VAV3b [KO:K05730 ]
560564 pdgfc; platelet-derived growth factor C isoform X3 [KO:K05450 ]
561737 pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
562496 col2a1a; collagen, type II, alpha 1a precursor [KO:K19719 ]
562838 rac1b; ras-related C3 botulinum toxin substrate 1b [KO:K04392 ]
564565 arhgap35b; rho GTPase-activating protein 35 [KO:K05732 ]
564921 bada; bcl2-associated agonist of cell death isoform X1 [KO:K02158 ]
566845 mylk4a; myosin light chain kinase 2, skeletal/cardiac muscle isoform X2 [KO:K00907 ] [EC:2.7.11.18 ]
567110 col9a3; collagen alpha-3(IX) chain precursor [KO:K08131 ]
567640 si:ch211-241e1.3; laminin subunit alpha-3 [KO:K06240 ]
567771 col6a2; collagen alpha-2(VI) chain isoform X2 [KO:K06238 ]
567895 elk1; ETS domain-containing protein Elk-1 [KO:K04375 ]
568309 bcar1; breast cancer anti-estrogen resistance protein 1 [KO:K05726 ]
568885 rasgrf1; ras-specific guanine nucleotide-releasing factor 1 isoform X2 [KO:K04349 ]
570218 ppp1r12c; protein phosphatase 1 regulatory subunit 12C [KO:K17457 ]
571753 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit A [KO:K06269 ] [EC:3.1.3.16 ]
571837 zmp:0000001167; protein phosphatase 1 regulatory subunit 12A isoform X2 [KO:K06270 ]
572187 dock1; dedicator of cytokinesis protein 1 [KO:K13708 ]
58100 badb; BCL2 associated agonist of cell death b isoform 1 [KO:K02158 ]
677750 myl2b; myosin, light chain 2b, regulatory, cardiac, slow [KO:K10351 ]
678512 vegfd; vascular endothelial growth factor D precursor [KO:K05449 ]
751630 zgc:153713; RhoA_like domain-containing protein [KO:K04513 ]
767790 pdgfab; platelet-derived growth factor alpha polypeptide b precursor [KO:K04359 ]
792699 rac1l; ras-related C3 botulinum toxin substrate 1 [KO:K04392 ]
795167 rac3b; ras-related C3 botulinum toxin substrate 3b [KO:K07861 ]
796490 pdgfbb; uncharacterized protein pdgfbb isoform X2 [KO:K04359 ]
796537 kdrl; vascular endothelial growth factor receptor kdr-like precursor [KO:K05096 ] [EC:2.7.10.1 ]
798657 pdgfba; platelet-derived growth factor beta polypeptide a precursor [KO:K17386 ]
798876 pip5k1ca; phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2 [KO:K00889 ] [EC:2.7.1.68 ]
Compound
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Berman AE, Kozlova NI, Morozevich GE.
Title
Integrins: structure and signaling.
Journal
Reference
Authors
Lee JW, Juliano R.
Title
Mitogenic signal transduction by integrin- and growth factor receptor-mediated pathways.
Journal
Mol Cells 17:188-202 (2004)
Reference
Authors
Danen EH, Yamada KM.
Title
Fibronectin, integrins, and growth control.
Journal
Reference
Authors
Guo W, Giancotti FG.
Title
Integrin signalling during tumour progression.
Journal
Reference
Authors
Petit V, Thiery JP.
Title
Focal adhesions: structure and dynamics.
Journal
Reference
Authors
Stupack DG, Cheresh DA.
Title
Get a ligand, get a life: integrins, signaling and cell survival.
Journal
Reference
Authors
Parsons JT.
Title
Focal adhesion kinase: the first ten years.
Journal
Reference
Authors
Mitra SK, Hanson DA, Schlaepfer DD.
Title
Focal adhesion kinase: in command and control of cell motility.
Journal
Reference
Authors
Comoglio PM, Boccaccio C, Trusolino L.
Title
Interactions between growth factor receptors and adhesion molecules: breaking the rules.
Journal
Reference
Authors
Schlaepfer DD, Mitra SK.
Title
Multiple connections link FAK to cell motility and invasion.
Journal
Reference
Authors
Burridge K, Wennerberg K.
Title
Rho and Rac take center stage.
Journal
Reference
Authors
Schmitz AA, Govek EE, Bottner B, Van Aelst L.
Title
Rho GTPases: signaling, migration, and invasion.
Journal
Reference
Authors
Vanhaesebroeck B, Alessi DR.
Title
The PI3K-PDK1 connection: more than just a road to PKB.
Journal
Reference
Authors
Nicholson KM, Anderson NG.
Title
The protein kinase B/Akt signalling pathway in human malignancy.
Journal
Reference
Authors
Oloumi A, McPhee T, Dedhar S.
Title
Regulation of E-cadherin expression and beta-catenin/Tcf transcriptional activity by the integrin-linked kinase.
Journal
Reference
Authors
Turner CE.
Title
Paxillin and focal adhesion signalling.
Journal
Reference
Authors
Hlobilkova A, Knillova J, Bartek J, Lukas J, Kolar Z.
Title
The mechanism of action of the tumour suppressor gene PTEN.
Journal
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 147:19-25 (2003)
Related pathway
dre04060 Cytokine-cytokine receptor interaction
dre04070 Phosphatidylinositol signaling system
dre04810 Regulation of actin cytoskeleton
KO pathway