KEGG   PATHWAY: stm00630
Entry
stm00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Salmonella enterica subsp. enterica serovar Typhimurium LT2
Class
Metabolism; Carbohydrate metabolism
Pathway map
stm00630  Glyoxylate and dicarboxylate metabolism
stm00630

Module
stm_M00012  Glyoxylate cycle [PATH:stm00630]
stm_M00621  Glycine cleavage system [PATH:stm00630]
Other DBs
GO: 0046487 0043648
Organism
Salmonella enterica subsp. enterica serovar Typhimurium LT2 [GN:stm]
Gene
STM0154  lpdA; lipoamide dehydrogenase (NADH) [KO:K00382] [EC:1.8.1.4]
STM0158  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
STM0369  prpC; putative citrate synthase [KO:K01659] [EC:2.3.3.5]
STM0517  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
STM0518  gip; glyoxylate -induced protein [KO:K01816] [EC:5.3.1.22]
STM0519  glxR; tartronic semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
STM0525  glxK; glycerate kinase II [KO:K00865] [EC:2.7.1.165]
STM0730  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
STM1135  ycdW; putative oxidoreductase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
STM1318  katE; catalase [KO:K03781] [EC:1.11.1.6]
STM1712  acnA; aconitate hydratase 1 [KO:K27802]
STM1756  purU; formyltetrahydrofolate hydrolase [KO:K01433] [EC:3.5.1.10]
STM1884  eda; 2-keto-3-deoxygluconate 6-phosphate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
STM2555  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
STM2959  [KO:K00865] [EC:2.7.1.165]
STM2973  fucO; L-1,2-propanediol oxidoreductase [KO:K00048] [EC:1.1.1.77]
STM3019  yqeF; putative acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
STM3053  gcvP; glycine cleavage complex protein P [KO:K00281] [EC:1.4.4.2]
STM3054  gcvH; glycine cleavage complex protein H [KO:K02437]
STM3055  gcvT; glycine cleavage complex protein T [KO:K00605] [EC:2.1.2.10]
STM3247  garK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
STM3248  garR; tartronate semialdehyde reductase (TSAR) [KO:K00042] [EC:1.1.1.60]
STM3354  [KO:K03780] [EC:4.2.1.32]
STM3355  [KO:K03779] [EC:4.2.1.32]
STM3359  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
STM3482  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
STM3646  yiaE; 2-keto-D-gluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
STM4007  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
STM4035  fdoI; formate dehydrogenase, cytochrome B556 (FDO) subunit [KO:K00127]
STM4036  fdoH; formate dehydrogenase-O, Fe-S subunit [KO:K00124]
STM4037  fdoG; formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
STM4183  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
STM4184  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
STM4275  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
stm00010  Glycolysis / Gluconeogenesis
stm00020  Citrate cycle (TCA cycle)
stm00030  Pentose phosphate pathway
stm00053  Ascorbate and aldarate metabolism
stm00071  Fatty acid degradation
stm00230  Purine metabolism
stm00250  Alanine, aspartate and glutamate metabolism
stm00260  Glycine, serine and threonine metabolism
stm00270  Cysteine and methionine metabolism
stm00620  Pyruvate metabolism
stm00710  Carbon fixation by Calvin cycle
stm00750  Vitamin B6 metabolism
stm00910  Nitrogen metabolism
KO pathway
ko00630   

DBGET integrated database retrieval system