Leaf sample from Solanum juzepczukii CIP_706050 - SRA

SRX6966566: Leaf sample from Solanum juzepczukii CIP_706050
1 ILLUMINA (Illumina HiSeq 1500) run: 153.7M spots, 46.1G bases, 17.1Gb downloads

Design: Re-sequencing of JUZ; a heterozygous Peruvian landrace with accession CIP_706050 with Illumina PE technology from leaf sample.

Submitted by: McGill University

Study: The impact of copy number variations in the genomes of 12 potato genomes of varying ploidy

PRJNA556263 • SRP224589 • All experiments • All runs

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Variations in ploidy level and structural variations are common in the genomes of various potato species, potentially aiding in diversifying agronomic traits. Genomic sequencing data from twelve potato landraces of various ploidy levels was used to identify structural variation compared to the two currently available reference genomes, a double monoploid (DM1-3) potato genome and the genome of the diploid inbred clone of S. chacoense (M6).

Sample:

SAMN12684892 • SRS5492337 • All experiments • All runs

Organism: Solanum x juzepczukii

Library:

Name: JUZ_TRP

Instrument: Illumina HiSeq 1500

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 153.7M spots, 46.1G bases, 17.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR10248512	153,736,713	46.1G	17.1Gb	2020-01-06

ID:: 9164352

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