Leaf sample from Solanum tuberosum subsp andigena CIP_700921, Illumin... - SRA

SRX6966563: Leaf sample from Solanum tuberosum subsp andigena CIP_700921, Illumina sequencing
1 ILLUMINA (Illumina HiSeq 1500) run: 194.2M spots, 42.7G bases, 15.9Gb downloads

Design: Re-sequencing of ADG1; a heterozygous Peruvian landrace with accession CIP_700921 with Illumina PE technology from leaf sample.

Submitted by: McGill University

Study: The impact of copy number variations in the genomes of 12 potato genomes of varying ploidy

PRJNA556263 • SRP224589 • All experiments • All runs

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Variations in ploidy level and structural variations are common in the genomes of various potato species, potentially aiding in diversifying agronomic traits. Genomic sequencing data from twelve potato landraces of various ploidy levels was used to identify structural variation compared to the two currently available reference genomes, a double monoploid (DM1-3) potato genome and the genome of the diploid inbred clone of S. chacoense (M6).

Sample:

SAMN12684893 • SRS5483882 • All experiments • All runs

Organism: Solanum tuberosum subsp. andigenum

Library:

Name: ADG1_TTR_ILL

Instrument: Illumina HiSeq 1500

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 194.2M spots, 42.7G bases, 15.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR10248515	194,180,200	42.7G	15.9Gb	2020-01-06

ID:: 9164349

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