RNAseq of sic-3 exposed to 28 degrees Celsius, replicate 1 - SRA

SRX11970138: RNAseq of sic-3 exposed to 28 degrees Celsius, replicate 1
1 ILLUMINA (Illumina HiSeq 4000) run: 32.4M spots, 9.7G bases, 3.9Gb downloads

Design: Poly(A) RNA isolated from total RNA with Dynabeads Oligo(dT) kit (Invitrogen). Library prepared with ScriptSeq v2 RNA-Seq library preparation kit (Epicentre). Libraries indexed with ScriptSeq Index PCR primers (Epicenter). Illumina HiSeq4000 paired-end sequencing at 150bp.

Submitted by: USDA-ARS

Study: Impact of sickle mutant and temperature on structure of transcripts and RNAs from Arabidopsis thaliana.

PRJNA758710 • SRP334808 • All experiments • All runs

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RNAseq profiling of Arabidopsis thaliana Columbia-0 wild type and sickle-3 mutant seedlings grown under 28 and 16 degrees Celsius. The goal was to identify how the RNA pool is altered by the interaction between temperature and the sickle mutant.

Sample: RNAseq of sic-3 exposed to 28 degrees Celsius, replicate 1

SAMN21032905 • SRS9979354 • All experiments • All runs

Organism: Arabidopsis thaliana

Library:

Name: sic-3_28_rep1

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Runs: 1 run, 32.4M spots, 9.7G bases, 3.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR15673674	32,372,213	9.7G	3.9Gb	2021-10-31

ID:: 15888368

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