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SRX16003744: Chromosome-level genome assembly of the Siberian chipmunk, Tamias sibiricus
1 ILLUMINA (HiSeq X Ten) run: 20M spots, 6G bases, 2Gb downloads

Design: Chromosome-level genome assembly
Submitted by: College of Life Sciences
Study: Tamias sibiricus isolate:XY-2022 Genome sequencing
show Abstracthide Abstract
Siberian chipmunk (Tamias sibiricus), a ground-dwelling squirrel species naturally distributed in north-eastern Eurasia from western Russia to northern Mongolia, Korea, the Kuril Islands, and Japan, is a predominant food scatter- hoarder that stores their food both in small scattered caches and underground hoards. Unlike the larder-hoarding animals, Siberian chipmunks rely on accurate spatial memory and olfaction to relocated the cached food. Here we provide a genome level sequence assembly to illustrate the genetic differences in spatial memory and olfaction between scatter- and larder-hoarding animals.
Sample:
SAMN24625226 • SRS13657965 • All experiments • All runs
Library:
Name: xfy
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM PCR
Layout: PAIRED
Runs: 1 run, 20M spots, 6G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR1996127820,046,3546G2Gb2022-10-04

ID:
22679576

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