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SRX2708522: Tea tree (Camellia sinensis var. assamica) whole genome sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 356.1M spots, 35.6G bases, 14.7Gb downloads

Submitted by: Plant Germplasm and Genomics Center, Germplasm Ban
Study: Camellia sinensis var. assamica cultivar:Yunkang 10 Transcriptome or Gene expression
show Abstracthide Abstract
Tea is the world's oldest and most important caffeine-containing beverage with immense economic, medicinal and cultural importance. We here perform de novo, full-genome sequence analysis of of Yunkang 10 (2n = 2x = 30 chromosomes), a diploid elite cultivar of C. sinensis var. assamica widely grown in Southwestern China based on sequence data from whole-genome shotgun sequencing. Together with comparative transcriptomic and phytochemical analyses for the representative Camellia species, we aim to obtain new insights into the molecular basis of the biosynthesis of the three characteristic secondary metabolites with an emphasis on tea-processing suitability and the formation of tea flavor.
Sample:
SAMN06687299 • SRS2101243 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Spot descriptor:
forward101  reverse

Runs: 1 run, 356.1M spots, 35.6G bases, 14.7Gb
Run# of Spots# of BasesSizePublished
SRR5416914356,113,93235.6G14.7Gb2017-05-02

ID:
3908378

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