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rpl-31 Large ribosomal subunit protein eL31 [ Caenorhabditis elegans ]

Gene ID: 173235, updated on 23-Nov-2023

Summary

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Gene symbol
rpl-31
Gene description
Large ribosomal subunit protein eL31
Primary source
WormBase:WBGene00004445
Locus tag
CELE_W09C5.6
See related
AllianceGenome:WB:WBGene00004445
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in body wall musculature; hypodermis; intestine; and pharynx. Orthologous to human RPL31 (ribosomal protein L31). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See rpl-31 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003279.8 (13652949..13653704, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein kinase dkf-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Inositol phosphatase domain-containing protein;SAC domain-containing protein Neighboring gene Cytochrome c oxidase subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Autosomal genes of autosomal/X-linked duplicated gene pairs and germ-line proliferation in Caenorhabditis elegans. Maciejowski J, et al. Genetics, 2005 Apr. PMID 15687263, Free PMC Article
  2. Caenorhabditis elegans evolves a new architecture for the multi-aminoacyl-tRNA synthetase complex. Havrylenko S, et al. J Biol Chem, 2011 Aug 12. PMID 21685384, Free PMC Article
  3. RbAp46/48(LIN-53) Is Required for Holocentromere Assembly in Caenorhabditis elegans. Lee BC, et al. Cell Rep, 2016 Mar 1. PMID 26904949
  4. The nascent polypeptide-associated complex is a key regulator of proteostasis. Kirstein-Miles J, et al. EMBO J, 2013 May 15. PMID 23604074, Free PMC Article
  5. Functional characterization of C. elegans Y-box-binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes. Arnold A, et al. Nucleic Acids Res, 2014 Dec 1. PMID 25378320, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Large ribosomal subunit protein eL31
NP_001366969.1
  • Confirmed by transcript evidence
NP_493391.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    13652949..13653704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060990.8 → NP_493391.1  Large ribosomal subunit protein eL31 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493391.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U331, Q9U332
    Conserved Domains (1) summary
    pfam01198
    Location:15 → 94
    Ribosomal_L31e; Ribosomal protein L31e

  2. NM_001381248.1 → NP_001366969.1  Large ribosomal subunit protein eL31 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    pfam01198
    Location:1 → 42
    Ribosomal_L31e; Ribosomal protein L31e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9U332.1

Gene LinkOut

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