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SAP30 Sin3A associated protein 30 [ Gallus gallus (chicken) ]

Gene ID: 422562, updated on 5-Mar-2024

Summary

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Symbol
SAP30provided by CGNC
Full Name
Sin3A associated protein 30provided by CGNC
Primary source
CGNC:8174
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (42881445..42887680)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (42835035..42841260)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC107051748 Neighboring gene high mobility group box 2 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene heart and neural crest derivatives expressed 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP30
Names
Sin3A-associated protein, 30kDa
sin3 associated polypeptide p30
sin3-associated polypeptide, 30kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    42881445..42887680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276542.4 → XP_015132028.2  histone deacetylase complex subunit SAP30

    Conserved Domains (2) summary
    pfam13866
    Location:60 → 128
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:147 → 199
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    42835035..42841260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040669250.2 → XP_040525184.1  histone deacetylase complex subunit SAP30

    Conserved Domains (2) summary
    pfam13866
    Location:60 → 128
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:147 → 199
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
Nucleotide Protein Strain
Heading Accession and Version

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