The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
-
XM_063810552.1 → XP_063666622.1 adenomatous polyposis coli protein isoform X10
-
XM_063810549.1 → XP_063666619.1 adenomatous polyposis coli protein isoform X7
-
XM_063810566.1 → XP_063666636.1 adenomatous polyposis coli protein isoform X16
-
XM_063810568.1 → XP_063666638.1 adenomatous polyposis coli protein isoform X19
-
XM_009449456.5 → XP_009447731.1 adenomatous polyposis coli protein isoform X5
- Conserved Domains (13) summary
-
- cd00020
Location:639 → 759
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- pfam05923
Location:1665 → 1689
- APC_crr; APC cysteine-rich region
- pfam05924
Location:2063 → 2082
- SAMP; SAMP Motif
- pfam05937
Location:2699 → 2872
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2252 → 2597
- APC_basic; APC basic domain
- pfam11414
Location:137 → 217
- Suppressor_APC; Adenomatous polyposis coli tumour suppressor protein
- pfam16629
Location:760 → 1047
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1064 → 1163
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1311 → 1396
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1690 → 1746
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1767 → 1867
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1904 → 1975
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
- sd00043
Location:591 → 623
- ARM; armadillo repeat [structural motif]
-
XM_009449466.5 → XP_009447741.1 adenomatous polyposis coli protein isoform X8
- Conserved Domains (13) summary
-
- cd00020
Location:621 → 741
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- pfam05923
Location:1647 → 1671
- APC_crr; APC cysteine-rich region
- pfam05924
Location:2045 → 2064
- SAMP; SAMP Motif
- pfam05937
Location:2681 → 2854
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2234 → 2579
- APC_basic; APC basic domain
- pfam11414
Location:137 → 217
- Suppressor_APC; Adenomatous polyposis coli tumour suppressor protein
- pfam16629
Location:742 → 1029
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1046 → 1145
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1293 → 1378
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1672 → 1728
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1749 → 1849
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1886 → 1957
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
- sd00043
Location:475 → 518
- ARM; armadillo repeat [structural motif]
-
XM_024356693.3 → XP_024212461.1 adenomatous polyposis coli protein isoform X17
- Conserved Domains (14) summary
-
- smart00185
Location:558 → 598
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:600 → 640
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:374 → 417
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1546 → 1569
- APC_r; APC repeat
- pfam05924
Location:1943 → 1962
- SAMP; SAMP Motif
- pfam05937
Location:2580 → 2753
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2133 → 2478
- APC_basic; APC basic domain
- pfam11414
Location:137 → 217
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:641 → 927
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:945 → 1044
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1192 → 1277
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1571 → 1624
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1655 → 1748
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1782 → 1856
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_063810557.1 → XP_063666627.1 adenomatous polyposis coli protein isoform X13
-
XM_063810560.1 → XP_063666630.1 adenomatous polyposis coli protein isoform X14
-
XM_063810561.1 → XP_063666631.1 adenomatous polyposis coli protein isoform X14
-
XM_009449459.5 → XP_009447734.1 adenomatous polyposis coli protein isoform X7
See identical proteins and their annotated locations for XP_009447734.1
- Conserved Domains (16) summary
-
- smart00185
Location:667 → 707
- ARM; Armadillo/beta-catenin-like repeats
- pfam16689
Location:4 → 55
- APC_N_CC; Coiled-coil N-terminus of APC, dimerisation domain
- sd00043
Location:581 → 613
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1655 → 1678
- APC_r; APC repeat
- pfam05924
Location:2052 → 2071
- SAMP; SAMP Motif
- pfam05937
Location:2689 → 2862
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2242 → 2587
- APC_basic; APC basic domain
- pfam11414
Location:127 → 207
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:750 → 1036
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1054 → 1153
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1301 → 1386
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1680 → 1733
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1764 → 1857
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1891 → 1965
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
- cl21727
Location:551 → 752
- VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...
- cl25732
Location:4 → 272
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_063810554.1 → XP_063666624.1 adenomatous polyposis coli protein isoform X10
-
XM_063810567.1 → XP_063666637.1 adenomatous polyposis coli protein isoform X16
-
XM_063810570.1 → XP_063666640.1 adenomatous polyposis coli protein isoform X19
-
XM_016953626.4 → XP_016809115.2 adenomatous polyposis coli protein isoform X6
- Conserved Domains (14) summary
-
- smart00185
Location:647 → 687
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:689 → 729
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:561 → 593
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1635 → 1658
- APC_r; APC repeat
- pfam05924
Location:2032 → 2051
- SAMP; SAMP Motif
- pfam05937
Location:2669 → 2842
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2222 → 2567
- APC_basic; APC basic domain
- pfam11414
Location:107 → 187
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:730 → 1016
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1034 → 1133
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1281 → 1366
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1660 → 1713
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1744 → 1837
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1871 → 1945
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_024356689.3 → XP_024212457.1 adenomatous polyposis coli protein isoform X9
- Conserved Domains (14) summary
-
- smart00185
Location:629 → 669
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:671 → 711
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:445 → 488
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1617 → 1640
- APC_r; APC repeat
- pfam05924
Location:2014 → 2033
- SAMP; SAMP Motif
- pfam05937
Location:2651 → 2824
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2204 → 2549
- APC_basic; APC basic domain
- pfam11414
Location:107 → 187
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:712 → 998
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1016 → 1115
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1263 → 1348
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1642 → 1695
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1726 → 1819
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1853 → 1927
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_024356694.3 → XP_024212462.1 adenomatous polyposis coli protein isoform X18
- Conserved Domains (14) summary
-
- smart00185
Location:528 → 568
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:570 → 610
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:344 → 387
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1516 → 1539
- APC_r; APC repeat
- pfam05924
Location:1913 → 1932
- SAMP; SAMP Motif
- pfam05937
Location:2550 → 2723
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2103 → 2448
- APC_basic; APC basic domain
- pfam11414
Location:107 → 187
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:611 → 897
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:915 → 1014
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1162 → 1247
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1541 → 1594
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1625 → 1718
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1752 → 1826
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_016953625.4 → XP_016809114.2 adenomatous polyposis coli protein isoform X3
- Conserved Domains (14) summary
-
- smart00185
Location:683 → 723
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:725 → 765
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:597 → 629
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1671 → 1694
- APC_r; APC repeat
- pfam05924
Location:2068 → 2087
- SAMP; SAMP Motif
- pfam05937
Location:2705 → 2878
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2258 → 2603
- APC_basic; APC basic domain
- pfam11414
Location:143 → 223
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:766 → 1052
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1070 → 1169
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1317 → 1402
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1696 → 1749
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1780 → 1873
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1907 → 1981
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_024356687.3 → XP_024212455.1 adenomatous polyposis coli protein isoform X4
- Conserved Domains (14) summary
-
- smart00185
Location:665 → 705
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:707 → 747
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:481 → 524
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1653 → 1676
- APC_r; APC repeat
- pfam05924
Location:2050 → 2069
- SAMP; SAMP Motif
- pfam05937
Location:2687 → 2860
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2240 → 2585
- APC_basic; APC basic domain
- pfam11414
Location:143 → 223
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:748 → 1034
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1052 → 1151
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1299 → 1384
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1678 → 1731
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1762 → 1855
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1889 → 1963
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_024356692.3 → XP_024212460.1 adenomatous polyposis coli protein isoform X15
- Conserved Domains (14) summary
-
- smart00185
Location:564 → 604
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:606 → 646
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:380 → 423
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1552 → 1575
- APC_r; APC repeat
- pfam05924
Location:1949 → 1968
- SAMP; SAMP Motif
- pfam05937
Location:2586 → 2759
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2139 → 2484
- APC_basic; APC basic domain
- pfam11414
Location:143 → 223
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:647 → 933
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:951 → 1050
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1198 → 1283
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1577 → 1630
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1661 → 1754
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1788 → 1862
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_063810556.1 → XP_063666626.1 adenomatous polyposis coli protein isoform X10
-
XM_063810555.1 → XP_063666625.1 adenomatous polyposis coli protein isoform X10
-
XM_063810551.1 → XP_063666621.1 adenomatous polyposis coli protein isoform X7
-
XM_063810559.1 → XP_063666629.1 adenomatous polyposis coli protein isoform X13
-
XM_063810558.1 → XP_063666628.1 adenomatous polyposis coli protein isoform X13
-
XM_063810565.1 → XP_063666635.1 adenomatous polyposis coli protein isoform X14
-
XM_054684528.2 → XP_054540503.1 adenomatous polyposis coli protein isoform X16
-
XM_063810571.1 → XP_063666641.1 adenomatous polyposis coli protein isoform X19
-
XM_063810550.1 → XP_063666620.1 adenomatous polyposis coli protein isoform X7
-
XM_063810563.1 → XP_063666633.1 adenomatous polyposis coli protein isoform X14
-
XM_063810564.1 → XP_063666634.1 adenomatous polyposis coli protein isoform X14
-
XM_024356686.3 → XP_024212454.1 adenomatous polyposis coli protein isoform X1
- Conserved Domains (14) summary
-
- smart00185
Location:682 → 722
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:724 → 764
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:596 → 628
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1670 → 1693
- APC_r; APC repeat
- pfam05924
Location:2067 → 2086
- SAMP; SAMP Motif
- pfam05937
Location:2704 → 2877
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2257 → 2602
- APC_basic; APC basic domain
- pfam11414
Location:142 → 222
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:765 → 1051
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1069 → 1168
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1316 → 1401
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1695 → 1748
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1779 → 1872
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1906 → 1980
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_016953628.4 → XP_016809117.2 adenomatous polyposis coli protein isoform X11
- Conserved Domains (14) summary
-
- smart00185
Location:581 → 621
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:623 → 663
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:495 → 527
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1569 → 1592
- APC_r; APC repeat
- pfam05924
Location:1966 → 1985
- SAMP; SAMP Motif
- pfam05937
Location:2603 → 2776
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2156 → 2501
- APC_basic; APC basic domain
- pfam11414
Location:142 → 222
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:664 → 950
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:968 → 1067
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1215 → 1300
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1594 → 1647
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1678 → 1771
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1805 → 1879
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_016953624.4 → XP_016809113.2 adenomatous polyposis coli protein isoform X2
- Conserved Domains (14) summary
-
- smart00185
Location:664 → 704
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:706 → 746
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:480 → 523
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1652 → 1675
- APC_r; APC repeat
- pfam05924
Location:2049 → 2068
- SAMP; SAMP Motif
- pfam05937
Location:2686 → 2859
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2239 → 2584
- APC_basic; APC basic domain
- pfam11414
Location:142 → 222
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:747 → 1033
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:1051 → 1150
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1298 → 1383
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1677 → 1730
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1761 → 1854
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1888 → 1962
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6
-
XM_024356690.3 → XP_024212458.1 adenomatous polyposis coli protein isoform X12
- Conserved Domains (14) summary
-
- smart00185
Location:563 → 603
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:605 → 645
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:379 → 422
- ARM; armadillo repeat [structural motif]
- pfam05923
Location:1551 → 1574
- APC_r; APC repeat
- pfam05924
Location:1948 → 1967
- SAMP; SAMP Motif
- pfam05937
Location:2585 → 2758
- EB1_binding; EB-1 Binding Domain
- pfam05956
Location:2138 → 2483
- APC_basic; APC basic domain
- pfam11414
Location:142 → 222
- Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
- pfam16629
Location:646 → 932
- Arm_APC_u3; Armadillo-associated region on APC
- pfam16630
Location:950 → 1049
- APC_u5; Unstructured region on APC between 1st and 2nd catenin-bdg motifs
- pfam16633
Location:1197 → 1282
- APC_u9; Unstructured region on APC between 1st two creatine-rich regions
- pfam16634
Location:1576 → 1629
- APC_u13; Unstructured region on APC between APC_crr and SAMP
- pfam16635
Location:1660 → 1753
- APC_u14; Unstructured region on APC between SAMP and APC_crr
- pfam16636
Location:1787 → 1861
- APC_u15; Unstructured region on APC between APC_crr regions 5 and 6