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GTF2H3 general transcription factor IIH subunit 3 [ Canis lupus familiaris (dog) ]

Gene ID: 477446, updated on 5-Mar-2024

Summary

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Official Symbol
GTF2H3provided by VGNC
Official Full Name
general transcription factor IIH subunit 3provided by VGNC
Primary source
VGNC:VGNC:111516
See related
Ensembl:ENSCAFG00845017053
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
13
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (6234737..6261341, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (6147525..6174121, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (6213786..6240388, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (6168228..6194816, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (6260228..6287181, complement)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V0 subunit a2 Neighboring gene uncharacterized LOC111092678 Neighboring gene tectonic family member 2 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha Neighboring gene DEAD-box helicase 55

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    6234737..6261341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436417.1 → XP_038292345.1  general transcription factor IIH subunit 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPX9
    Conserved Domains (1) summary
    cl22919
    Location:7 → 246
    Tfb4; Transcription factor Tfb4

  2. XM_038436416.1 → XP_038292344.1  general transcription factor IIH subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8I3P3S7, A0A8P0PSQ2
    Related
    ENSCAFP00845023709.1, ENSCAFT00845030232.1
    Conserved Domains (1) summary
    cl22919
    Location:7 → 266
    Tfb4; Transcription factor Tfb4

  3. XM_038436415.1 → XP_038292343.1  general transcription factor IIH subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8C0TNI3, A0A8I3P9S2
    Related
    ENSCAFP00845023691.1, ENSCAFT00845030215.1
    Conserved Domains (1) summary
    TIGR00627
    Location:7 → 289
    tfb4; transcription factor tfb4

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    6168228..6194816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511335.1 → XP_038367263.1  general transcription factor IIH subunit 3 isoform X3

    Conserved Domains (1) summary
    cl22919
    Location:7 → 246
    Tfb4; Transcription factor Tfb4

  2. XM_038511334.1 → XP_038367262.1  general transcription factor IIH subunit 3 isoform X2

    Conserved Domains (1) summary
    cl22919
    Location:7 → 266
    Tfb4; Transcription factor Tfb4

  3. XM_038511333.1 → XP_038367261.1  general transcription factor IIH subunit 3 isoform X1

    Conserved Domains (1) summary
    TIGR00627
    Location:7 → 289
    tfb4; transcription factor tfb4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    6260228..6287181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038639005.1 → XP_038494933.1  general transcription factor IIH subunit 3 isoform X3

    Conserved Domains (1) summary
    cl22919
    Location:7 → 246
    Tfb4; Transcription factor Tfb4

  2. XM_038639004.1 → XP_038494932.1  general transcription factor IIH subunit 3 isoform X2

    Conserved Domains (1) summary
    cl22919
    Location:7 → 266
    Tfb4; Transcription factor Tfb4

  3. XM_038639003.1 → XP_038494931.1  general transcription factor IIH subunit 3 isoform X1

    Conserved Domains (1) summary
    TIGR00627
    Location:7 → 289
    tfb4; transcription factor tfb4

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    6213786..6240388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038574817.1 → XP_038430745.1  general transcription factor IIH subunit 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPX9
    Conserved Domains (1) summary
    cl22919
    Location:7 → 246
    Tfb4; Transcription factor Tfb4

  2. XM_038574816.1 → XP_038430744.1  general transcription factor IIH subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8I3P3S7, A0A8P0PSQ2
    Conserved Domains (1) summary
    cl22919
    Location:7 → 266
    Tfb4; Transcription factor Tfb4

  3. XM_038574815.1 → XP_038430743.1  general transcription factor IIH subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8C0TNI3, A0A8I3P9S2
    Conserved Domains (1) summary
    TIGR00627
    Location:7 → 289
    tfb4; transcription factor tfb4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    6147525..6174121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022410528.2 → XP_022266236.1  general transcription factor IIH subunit 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPX9
    Conserved Domains (1) summary
    cl22919
    Location:7 → 246
    Tfb4; Transcription factor Tfb4

  2. XM_014108056.3 → XP_013963531.1  general transcription factor IIH subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8I3P3S7, A0A8P0PSQ2
    Conserved Domains (1) summary
    cl22919
    Location:7 → 266
    Tfb4; Transcription factor Tfb4

  3. XM_534644.7 → XP_534644.1  general transcription factor IIH subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPX9, A0A8C0TNI3, A0A8I3P9S2
    Conserved Domains (1) summary
    TIGR00627
    Location:7 → 289
    tfb4; transcription factor tfb4
Nucleotide Protein
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