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Dlgap5l1 DLG associated protein 5 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 103692302, updated on 3-Dec-2024

Summary

Official Symbol
Dlgap5l1provided by RGD
Official Full Name
DLG associated protein 5 like 1provided by RGD
Primary source
RGD:9116417
See related
EnsemblRapid:ENSRNOG00000063229 AllianceGenome:RGD:9116417
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Testes (RPKM 73.2) and Spleen (RPKM 3.0) See more
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Genomic context

See Dlgap5l1 in Genome Data Viewer
Location:
5q13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (29466673..29517285)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (24671173..24720087)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (24755719..24857347)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene enolase 1, pseudogene 21 Neighboring gene ribosomal protein L24 like 2 Neighboring gene RNA binding protein with serine rich domain 1, pseudogene 5 Neighboring gene ST13, Hsp70 interacting protein, pseudogene 6 Neighboring gene CD99 molecule like 4 Neighboring gene discs large MAGUK scaffold protein 5 like 7

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    29466673..29517285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039110931.2XP_038966859.1  disks large homolog 5-like

    UniProtKB/TrEMBL
    A0A8I6ADJ2
    Related
    ENSRNOP00000092194.2, ENSRNOT00000104746.2
    Conserved Domains (1) summary
    pfam04822
    Location:79159
    Takusan
  2. XM_063261259.1XP_063117329.1  disks large homolog 5-like

    UniProtKB/TrEMBL
    A0A8I6ADJ2
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