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LOC103692396 proteoglycan 4-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 103692396, discontinued on 23-Mar-2021
  • This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Summary

Symbol
LOC103692396provided by RGD
Full Name
proteoglycan 4-likeprovided by RGD
Primary source
RGD:9323188
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Expression
Biased expression in Lung (RPKM 1.8), Brain (RPKM 1.1) and 9 other tissues See more
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Genomic context

See LOC103692396 in Genome Data Viewer
Location:
5q31
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (101262599..101264436, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) 5 AC_000073.1 (96119091..96121071, complement)

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Names
proteoglycan 4-like
mucin-6-like
putative cell agglutination protein 1742.01

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005104.4 Reference Rnor_6.0 Primary Assembly

    Range
    101262599..101264436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008763838.2XP_008762060.1  

Alternate Rn_Celera

Genomic

  1. AC_000073.1 Alternate Rn_Celera

    Range
    96119091..96121071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008775990.2XP_008774212.1  

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