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LOC103692418 uncharacterized LOC103692418 [ Rattus norvegicus (Norway rat) ]

Gene ID: 103692418, updated on 29-Feb-2024

Summary

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Symbol
LOC103692418provided by RGD
Full Name
uncharacterized LOC103692418provided by RGD
Primary source
RGD:9417869
See related
AllianceGenome:RGD:9417869
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 15.0), Liver (RPKM 13.7) and 9 other tissues See more
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Genomic context

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See LOC103692418 in Genome Data Viewer
Location:
5q33
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (115715980..115829925, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (110605125..110712729, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (114734825..114828061, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120102924 Neighboring gene U1 spliceosomal RNA Neighboring gene FGGY carbohydrate kinase domain containing Neighboring gene uncharacterized LOC120102925 Neighboring gene hook microtubule-tethering protein 1 Neighboring gene cytochrome P450 2J3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    115715980..115829925 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010051926.1 RNA Sequence

  2. XR_010051923.1 RNA Sequence

  3. XR_010051925.1 RNA Sequence

  4. XR_010051921.1 RNA Sequence

  5. XR_010051920.1 RNA Sequence

  6. XR_010051922.1 RNA Sequence

  7. XR_010051924.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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