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Pramel6 preferentially expressed antigen in melanoma-like 6 [ Rattus norvegicus (Norway rat) ]

Gene ID: 502648, updated on 4-Jan-2025

Summary

Official Symbol
Pramel6provided by RGD
Official Full Name
preferentially expressed antigen in melanoma-like 6provided by RGD
Primary source
RGD:1565946
See related
EnsemblRapid:ENSRNOG00000021920 AllianceGenome:RGD:1565946
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565946
Summary
Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul2-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See Pramel6 in Genome Data Viewer
Location:
3q24
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (93341299..93344771)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (72885018..72888490)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (75559775..75563247)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 12 subfamily E member 7 Neighboring gene preferentially expressed antigen in melanoma-like 7 Neighboring gene olfactory receptor family 8 subfamily W member 1B Neighboring gene olfactory receptor family 5 subfamily W member 22

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex  
is_active_in cytoplasm  

General protein information

Preferred Names
preferentially expressed antigen in melanoma-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109342.1NP_001102812.1  preferentially expressed antigen in melanoma-like 6

    See identical proteins and their annotated locations for NP_001102812.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473949
    UniProtKB/TrEMBL
    A6HMZ3, D3ZD67
    Related
    ENSRNOP00000031686.4, ENSRNOT00000035844.6

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    93341299..93344771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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