Heterochromatin protein 1 interacts with 5'UTR of transposable element ZAM in a sequence-specific fashion

Gene. 2007 May 15;393(1-2):1-10. doi: 10.1016/j.gene.2006.12.028. Epub 2007 Jan 19.

Abstract

The realization of cross talks between transposable elements of class I and their host genome involves non-histonic chromatin proteins. These interactions have been widely analyzed through the characterization of the gypsy retrotransposon leader region, which holds a particularly strong insulator element, and the proteins required for its function, Su(Hw), Mod(mdg4), and Cp190. Here we provide evidence that a similar interaction should occur between ZAM, a gypsy-like element, and HP1, one of the most extensively studied chromatin proteins. We first assayed the existence of this binding using the yeast cells one-hybrid system and then we verified it in vivo by ChIP assay. In order to characterize the interaction between HP1 and the ZAM 5' untranslated region we performed a series of gel shift analyses. Our observations confirm an HP1 co-operative DNA-binding and display for the first time the HP1 DNA target motif that, we hypothesize, should be one of its nucleation sites.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions / genetics*
  • 5' Untranslated Regions / metabolism*
  • Animals
  • Base Sequence
  • Chromobox Protein Homolog 5
  • Chromosomal Proteins, Non-Histone / metabolism*
  • DNA Transposable Elements / genetics*
  • Drosophila Proteins / metabolism
  • Drosophila melanogaster / genetics*
  • Drosophila melanogaster / metabolism*
  • Models, Genetic
  • Molecular Sequence Data
  • Protein Binding
  • Retroelements / genetics
  • Tandem Repeat Sequences / genetics

Substances

  • 5' Untranslated Regions
  • Chromosomal Proteins, Non-Histone
  • DNA Transposable Elements
  • Drosophila Proteins
  • Retroelements
  • Chromobox Protein Homolog 5