The transcription factor Zfp281 controls embryonic stem cell pluripotency by direct activation and repression of target genes

Stem Cells. 2008 Nov;26(11):2791-9. doi: 10.1634/stemcells.2008-0443. Epub 2008 Aug 28.

Abstract

Oct4, Sox2, and Nanog are key components of a core transcriptional regulatory network that controls the ability of embryonic stem cells to differentiate into all cell types. Here we show that Zfp281, a zinc finger transcription factor, is a key component of the network and that it is required to maintain pluripotency. Zfp281 was shown to directly activate Nanog expression by binding to a site in the promoter in very close proximity to the Oct4 and Sox2 binding sites. We present data showing that Zfp281 physically interacts with Oct4, Sox2, and Nanog. Chromatin immunoprecipitation experiments identified 2,417 genes that are direct targets for regulation by Zfp281, including several transcription factors that are known regulators of pluripotency, such as Oct4, Sox2, and Nanog. Gene expression microarray analysis indicated that some Zfp281 target genes were activated, whereas others were repressed, upon knockdown of Zfp281. The identification of both activation and repression domains within Zfp281 suggests that this transcription factor plays bifunctional roles in regulating gene expression within the network. Disclosure of potential conflicts of interest is found at the end of this article.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Cell Differentiation
  • Cell Line
  • Embryonic Stem Cells / cytology*
  • Gene Expression Regulation
  • Homeodomain Proteins / metabolism
  • Humans
  • Mice
  • Molecular Sequence Data
  • Nanog Homeobox Protein
  • Octamer Transcription Factor-3 / metabolism
  • Pluripotent Stem Cells / cytology*
  • Promoter Regions, Genetic
  • Protein Binding
  • Protein Structure, Tertiary
  • SOXB1 Transcription Factors / metabolism
  • Transcription Factors / physiology*
  • Zinc Fingers / physiology*

Substances

  • Homeodomain Proteins
  • Nanog Homeobox Protein
  • Nanog protein, mouse
  • Octamer Transcription Factor-3
  • Pou5f1 protein, mouse
  • SOXB1 Transcription Factors
  • Sox2 protein, mouse
  • Transcription Factors
  • Zfp281 protein, mouse