Regulation of HIV-1 Gag-Pol Expression by Shiftless, an Inhibitor of Programmed -1 Ribosomal Frameshifting

Cell. 2019 Jan 24;176(3):625-635.e14. doi: 10.1016/j.cell.2018.12.030.

Abstract

Programmed -1 ribosomal frameshifting (-1PRF) is a widely used translation recoding mechanism. HIV-1 expresses Gag-Pol protein from the Gag-coding mRNA through -1PRF, and the ratio of Gag to Gag-Pol is strictly maintained for efficient viral replication. Here, we report that the interferon-stimulated gene product C19orf66 (herein named Shiftless) is a host factor that inhibits the -1PRF of HIV-1. Shiftless (SFL) also inhibited the -1PRF of a variety of mRNAs from both viruses and cellular genes. SFL interacted with the -1PRF signal of target mRNA and translating ribosomes and caused premature translation termination at the frameshifting site. Downregulation of translation release factor eRF3 or eRF1 reduced SFL-mediated premature translation termination. We propose that SFL binding to target mRNA and the translating ribosome interferes with the frameshifting process. These findings identify SFL as a broad-spectrum inhibitor of -1PRF and help to further elucidate the mechanisms of -1PRF.

Keywords: Gag-Pol; HIV-1; host antiviral factor; premature translation termination; programmed -1 ribosomal frameshifting; translation recoding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Frameshifting, Ribosomal / genetics
  • Fusion Proteins, gag-pol / genetics*
  • Gene Expression Regulation, Viral / genetics
  • HIV-1 / genetics*
  • Humans
  • Nucleic Acid Conformation
  • Protein Biosynthesis
  • RNA, Messenger / metabolism
  • RNA, Viral / metabolism
  • Ribosomes / metabolism
  • Virus Replication / genetics

Substances

  • Fusion Proteins, gag-pol
  • RNA, Messenger
  • RNA, Viral