MEMOTE for standardized genome-scale metabolic model testing

Affiliations

• ¹ Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
• ² Systems Biology Lab, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.
• ³ BioQUANT/COS, Heidelberg University, Heidelberg, Germany.
• ⁴ Ecole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
• ⁵ iAMB-Institute of Applied Microbiology, ABBt-Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany.
• ⁶ Department of Bioengineering, University of California, La Jolla, CA, USA.
• ⁷ Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.
• ⁸ Human Systems Biology Laboratory, Instituto Nacional de Medicina Genomica & Coordinación de la Investigación Científica-Red de Apoyo a la Investigación, UNAM, Mexico City, Mexico.
• ⁹ Institute for Systems Biology, Seattle, WA, USA.
• ¹⁰ Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Biomedical Informatics (IBMI), Tübingen, Germany.
• ¹¹ Department of Computer Science, University of Tübingen, Tübingen, Germany.
• ¹² German Center for Infection Research (DZIF), partner site Tübingen, Tübingen, Germany.
• ¹³ Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia.
• ¹⁴ Argonne National Laboratory, Lemont, IL, USA.
• ¹⁵ Analytical Biosciences, Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research, Leiden University, Leiden, the Netherlands.
• ¹⁶ Department of Systems Biology, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain.
• ¹⁷ Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA), Universidad Politécnica de Madrid (UPM) - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain.
• ¹⁸ Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Oslo, Norway.
• ¹⁹ Hanze University of Applied Sciences, Groningen, the Netherlands.
• ²⁰ European Bioinformatics Institute, European Molecular Biology Laboratory (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.
• ²¹ Department of Chemical and Biomolecular Engineering (BK21 Plus Program), BioProcess Engineering Research Center, BioInformatics Research Center, Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea.
• ²² Analysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems Magdeburg, Magdeburg, Germany.
• ²³ Theoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.
• ²⁴ Department of Agrotechnology and Food Sciences, Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands.
• ²⁵ Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
• ²⁶ School of Chemical Engineering Sungkyunkwan University, Jangan-gu Suwon, Gyeonggi-do, Republic of Korea.
• ²⁷ Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden.
• ²⁸ Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London, London, UK.
• ²⁹ Department of Pediatrics and Novo Nordisk Foundation Center for Biosustainability, University of California, San Diego School of Medicine, La Jolla, CA, USA.
• ³⁰ Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, P.R. China.
• ³¹ Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
• ³² Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Canada.
• ³³ SilicoLife Lda., Braga, Portugal.
• ³⁴ Department of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
• ³⁵ Chalmers University of Technology, Department of Biology and Biological Engineering, Division of Systems and Synthetic Biology, Göteborg, Sweden.
• ³⁶ Department of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences (UAMS), Little Rock, AR, USA.
• ³⁷ Oxford Brookes University, Oxford, UK.
• ³⁸ Centre of Biological Engineering, University of Minho, Braga, Portugal.
• ³⁹ Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB-NOVA), Oeiras, Portugal.
• ⁴⁰ Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark. niso@biosustain.dtu.dk.
• ⁴¹ Institute for Molecular Evolution, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany.