Tmem26 (transmembrane protein 26)

Gene: Tmem26 (transmembrane protein 26) Rattus norvegicus

Analyze

Symbol:

Tmem26

Name:

transmembrane protein 26

RGD ID:

1309273

Description:

Orthologous to human TMEM26 (transmembrane protein 26); INTERACTS WITH acetamide; bisphenol A; bromobenzene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC309724

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM26 (transmembrane protein 26)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tmem26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem26 (transmembrane protein 26)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	STAM (signal transducing adaptor molecule)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TMEM26 (transmembrane protein 26)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem26 (transmembrane protein 26)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem26a (transmembrane protein 26a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem26b (transmembrane protein 26b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG14238	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y119C1B.3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tmem26	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	19,819,780 - 19,872,978 (-)	NCBI		GRCr8
mRatBN7.2	20	19,820,768 - 19,872,561 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	19,822,975 - 19,872,023 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	20,551,919 - 20,600,969 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	19,904,377 - 19,953,425 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	20,379,620 - 20,428,657 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	21,640,655 - 21,689,655 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	21,642,484 - 21,689,553 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	23,740,900 - 23,789,900 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	20,629,275 - 20,680,206 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	20,644,950 - 20,693,757 (-)	NCBI
Celera	20	21,190,396 - 21,239,448 (-)	NCBI		Celera
Cytogenetic Map	20	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Autosomal Dominant Intellectual Developmental Disorder 70 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-palmitoylglycerol (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bromobenzene (EXP)

buta-1,3-diene (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

folic acid (ISO)

furan (EXP)

Geniposide (ISO)

genistein (ISO)

melphalan (ISO)

mono(2-ethylhexyl) phthalate (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

propanal (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (EXP)

triticonazole (EXP)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Tmem26
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	19,819,780 - 19,872,978 (-)	NCBI		GRCr8
mRatBN7.2	20	19,820,768 - 19,872,561 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	19,822,975 - 19,872,023 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	20,551,919 - 20,600,969 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	19,904,377 - 19,953,425 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	20,379,620 - 20,428,657 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	21,640,655 - 21,689,655 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	21,642,484 - 21,689,553 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	23,740,900 - 23,789,900 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	20,629,275 - 20,680,206 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	20,644,950 - 20,693,757 (-)	NCBI
Celera	20	21,190,396 - 21,239,448 (-)	NCBI		Celera
Cytogenetic Map	20	p11	NCBI

TMEM26
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	61,406,642 - 61,453,381 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	61,406,642 - 61,453,381 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	63,166,400 - 63,213,139 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	62,836,414 - 62,883,214 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	62,836,413 - 62,883,214	NCBI
Celera	10	56,433,398 - 56,480,207 (-)	NCBI		Celera
Cytogenetic Map	10	q21.2	NCBI
HuRef	10	57,155,405 - 57,202,187 (-)	NCBI		HuRef
CHM1_1	10	63,448,585 - 63,495,392 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	62,263,409 - 62,310,147 (-)	NCBI		T2T-CHM13v2.0

Tmem26
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	68,559,576 - 68,618,485 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	68,559,476 - 68,618,480 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	68,723,746 - 68,782,655 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	68,723,646 - 68,782,650 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	68,186,494 - 68,245,402 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	68,119,125 - 68,175,971 (+)	NCBI		MGSCv36	mm8
Celera	10	69,821,833 - 69,878,470 (+)	NCBI		Celera
Cytogenetic Map	10	B5.3	NCBI
cM Map	10	35.64	NCBI

Tmem26
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	14,789,351 - 14,828,758 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	14,787,440 - 14,828,596 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM26
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	73,621,621 - 73,667,142 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	73,626,755 - 73,672,347 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	57,943,726 - 57,990,163 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	60,274,519 - 60,320,369 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	60,274,208 - 60,320,369 (-)	Ensembl	panpan1.1		panPan2

TMEM26
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	13,461,953 - 13,508,548 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	13,464,262 - 13,509,232 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	13,666,146 - 13,714,125 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	13,723,403 - 13,771,511 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	13,723,429 - 13,772,479 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	13,712,739 - 13,760,665 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	13,828,001 - 13,875,960 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	14,193,121 - 14,241,168 (-)	NCBI		UU_Cfam_GSD_1.0

Tmem26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	67,573,001 - 67,617,989 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936614	1,659,426 - 1,703,182 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM26
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	64,877,935 - 64,925,505 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	64,881,216 - 64,925,449 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	69,957,059 - 70,001,294 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM26
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	69,824,830 - 69,871,969 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	69,842,831 - 69,868,283 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	30,711,890 - 30,760,239 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem26
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624791	2,258,289 - 2,297,599 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624791	2,256,585 - 2,297,603 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tmem26
267 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	584
Count of miRNA genes:	275
Interacting mature miRNAs:	322
Transcripts:	ENSRNOT00000038095
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24159021	Rat
1600382	Edcs3	Endometrial carcinoma susceptibility QTL3	3.5	0.003	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	20	1	25159026	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29191651	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29191651	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29191651	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29191651	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29191651	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1527842	46527842	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1530655	46530655	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	2606836	47606836	Rat
2317057	Aia27	Adjuvant induced arthritis QTL 27	2.83		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	20	2892597	26381954	Rat
4889870	Pur30	Proteinuria QTL 30	19	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	20	8042410	29322208	Rat
7411652	Foco24	Food consumption QTL 24		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	11757515	54435887	Rat
9590092	Insglur9	Insulin/glucose ratio QTL 9	18.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	20	11757515	54435887	Rat
4889610	Pancm3	Pancreatic morphology QTL 3	3.75	0.001	pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	20	17617832	47606836	Rat
2317880	Alcrsp25	Alcohol response QTL 25	2.3		response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	17697550	54435887	Rat
2303626	Vencon10	Ventilatory control QTL 10		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	20	19190721	54435887	Rat

Markers in Region

BE104822

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	19,824,403 - 19,824,616 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	21,642,084 - 21,642,296	NCBI	Rnor6.0
Rnor_5.0	20	23,742,329 - 23,742,541	UniSTS	Rnor5.0
RGSC_v3.4	20	20,630,704 - 20,630,916	UniSTS	RGSC3.4
Celera	20	21,191,825 - 21,192,037	UniSTS
Cytogenetic Map	20	p11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			2	2	9	2					3	10
Low	1	42	53	37	10	37	2	2	63	34	32	1	2
Below cutoff	2	1	2	2		2	6	8	11	1	6		6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005497258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000038095 ⟹ ENSRNOP00000038308

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	19,822,975 - 19,872,023 (-)	Ensembl
Rnor_6.0 Ensembl	20	21,642,484 - 21,689,553 (-)	Ensembl

RefSeq Acc Id:

NM_001107623 ⟹ NP_001101093

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	19,821,991 - 19,871,041 (-)	NCBI
mRatBN7.2	20	19,822,975 - 19,872,023 (-)	NCBI
Rnor_6.0	20	21,640,655 - 21,689,655 (-)	NCBI
Rnor_5.0	20	23,740,900 - 23,789,900 (-)	NCBI
RGSC_v3.4	20	20,629,275 - 20,680,206 (-)	RGD
Celera	20	21,190,396 - 21,239,448 (-)	RGD

Sequence:

show sequence

AGTTGCCTGCAGAGCCCAGCAGCCAGGAGAAGCTCTGGCTTTGGATTCTGTCTTTGAAGAGTTC
TCTGGAAGTTGGAGGGGCGGGGCAAGCGGCGCTCTCCTGTCCTACTGGAGTCTTGCGCGGGAGT
GTGAGCGAGAAAGACAATCACAGTCCCAGAGCTGTCCGGCTCCTGAGCTGAGGTGGACCCCCGG
TGCTGCCCACGGGGTCGGTAGGGCGCAGGCGCTGGGCTGACAGAGCGCAAGGGCAGAATGGAGG
GGCTGGTCTTGCTCAAGGCCCTGGTCACTCGGCTGCTGTTCCTGTTGCATTCCCTGGTCGCTGT
CTGGAGAGTGACCTGGGTGAAGGAAGAGCACCGTTACTGGCTGCTGGCTCTGCTCAACCTCTTG
CTGGTCCTGGAGACGGTGCTCACTCTCAAGTTCAAGCGCGGCCGAGGCTACAAATGGCTTTCTC
CAGCCATCTTTTTGTACCTGATCAACATCATGCCGTCCCTGTGGCTCCTTGAAATGCACCATGG
AAACCAGTATTGCAGCACGCAGTCTGAGACGGCAGCCCAGAACTTCAGCGGAAGAGGAGACATC
AATCAAACCCTGTCATCCCACAGAGCCACCGATGGCGTGGGGAATATTCTTGAACTGGCCAGAG
GCTTTGTTGACAACTTATCCATGGTATGTGAACCAGTCTGGACGTTAGGACTCCACCAAACACT
CCTGCTAATATTAATCATTGGACGGTGGCTTCTCCCCATCGGAGGGACCATTACTAGAGACCAA
CTCTCGGAACTTCTTCTGATGTTCGTGGGGACGGCGGCAGACATACTGGAGTTCACTACTGAGA
CTCTGAAGGAAAATAATGTCAGAAATAACCCTGCACTGGTCTCGGGAATCCTTGTGGTGTGGAC
TTGGAGCATGCTCCAGTTTCCCCTTGACCTGGCAGTCCAGTTGAAACTGGTATGCCCCGCCTCA
GTGAAAGCCAGGGGCTTCCTTAGGGTTTTCCTGTGCCAGTACAGTGCGGATCTATGGGCCATTG
GCCTTAGCTTCTTCATCCAAGATGGCCCCTTCCTTGTGGTGCGCCTCGTCCTGATGATCTACTT
CAAAGTGATCAACCACATGTTGGTGTTCTTTGCTGTGAAGAATTCCCTGGTGATGGCTCTTCAT
TTCTACCGGCTTGTGGCTTTGATCATGGCTACCCGTGATTTCATGCAAGATCATCCAGAAAGTC
CCAAAACGGAGCACAGTGGCCCGGACCAGCCTTCTGAGAGTGGGCCCAGTGAATGGGAGGACAC
CTCCCCGGAGGCTCTGCCTTTGCGAATCTCACCGGTCACCTCTGAGGAGTCTTACCCGACAACG
CCTTAGTTACTGTTTCTAACATGCAGCGGCAAGGCTTGACTCCTTCCCTTCTTGTAGACTGTTT
CTCTTCTTACCCCCGCCCCACGTTTGCATACAACATTTTTTTTTTAAGGAATCAACATGAAAAA
GATGATCTTGTCTCAAAGTCAAAGTACTGCTCTAGTTTTTCATCTGAGTGGAAGGAACTTTGAC
AAGTGGCTGTCACTATAATCTTCTGCTTCGATAGTGGACATTACACTTCTCTGGGAACCATTCT
GAGTGATTGGTTCTTAATGAATTGCTTGAAAAGTTGTAGGCCGGACATCATAGCAACCCTCCAA
TGACTTAAGGCAGACATTTGCCACAAACTTCCCTATCTCTTGTTCTCCCTGGTTGCCTAATAGT
ACAGAAACTTTTGACTGGCTAGACTGTCACTCTCTCATCTGAGGCTTTCTGCAATGTCCCTCTG
ACATTAAAAAAAAAAATGTATACTCAGTGAATTCTGAGCAAAGGAAAGGAAAATGTTCTTAAAA
TCAACTTGCCATGGGCTAGAATCCGGGAACTAGCACGGCTTAGCTTCCTCTGTGGAGAAAAATA
GCTGTGGTAGCTGCACAGGCCTTTACAGGAATCCCATTCTCCTGGACCAAGGTGCCATTCTGTG
TTCTTAGAGCATTGTGATGGCTTTGGGCTTGGGTAGCACAAAGTTCACAACAAGTCACTTGGTT
TCTACCAACTTCGTAGCCAGGCGATATCAATGAGACACCTGCAAGTCACACTTTCCACCTAGTA
CAATTTACAGGACCGCTGGTATTTAAATGCTTGGCTACCCTTTTCTTCATTGTCAAGGTGAATC
ATGTGATCGGGGTCCAAGGAGCAGTAGCATGCCGTGATGAAGGAGTCTGAGGCCCTTAGCGTTA
CCATGGTTTCTGGCCGCTGCCAGCAGCTGCTGCAGAAGCAGCGACAGTAACAGAGATTGGTGTA
GGGCCAAGGAAATGCCATCACTGGCCCCAGCTCGGTTTCAGGAACAAGTTAGTGGAAGGTGGTG
CCAATCTCATGCCTCCATGAATGTAGGGAGTTGCTACAGGCCACCCTGGGGACTCATGGTGGCT
TCATTTCCCATGAATGGAATAGTTTTTCTCTTCCACAGTGCTGTACATTCTAGGTGGAAATGAC
TCCAAGCCTTTGAAAGTAGCTCTTTCTTTGAAATACATGGTAAAAATGTGACTTATGTTATTTT
AGATCTAAAATTGCAATGTTAGAGTTAACGGCACCAGCCAAGCCATACTAGAATCCCCAGAAAG
ACATTTATTCATCAAACTTCCTAGATTGAAGATGACCATTAGACAATCAGTTGGGACAATTATT
TTTTTCAAACCTATGAATTTCTGGTATAGTATTTATCCAATATGTTTGATAACAAGTTTTATAA
ACAAATTCTATTTTATACAAAACCACCACTGTCTTTCTAGTCATTTCTACTTCCTTTTGTTTTA
ATACTGTCATGGTTGTAAAATGTTCAGCAAACAAATGGAATGCATTAGTAATTTTTCATAATTG
GTGTATGCAAGCTAAGGTCAAGATTGTATTTACGTAAGTGAAGAATGTGACAACTTTTAAAGAT
GCATTATTCAAAGTTCTTGGCAATGACACTCAGGGACATGTCCCATGGTTAAGAGCATGAATTG
CTCTTGCAGAGGATCAGAATTTGTCCCCATCTACTCCACGGGTTTTACAACCACTTGTAGCTCC
AGCTTTGGGGGCTGCTTTTAGCCTCCGTGAGAACTAACTGCATTCATGTATGTGTGCACTCATA
CACAGAGAGATTTATTAAAAGTAATAAAACTATTTTATAATAAAAAAGTCAGTAATGGGATGCA
AACAAGAAAAAGCAATACTACTTCTC

hide sequence

RefSeq Acc Id:

XM_039098744 ⟹ XP_038954672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	19,819,780 - 19,854,470 (-)	NCBI
mRatBN7.2	20	19,820,768 - 19,855,451 (-)	NCBI

RefSeq Acc Id:

XR_005497258

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	19,824,256 - 19,872,978 (-)	NCBI
mRatBN7.2	20	19,825,208 - 19,872,561 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101093	(Get FASTA)	NCBI Sequence Viewer
	XP_038954672	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL97308	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000038308
	ENSRNOP00000038308.2

RefSeq Acc Id:

NP_001101093 ⟸ NM_001107623

- UniProtKB:

D4ADJ8 (UniProtKB/TrEMBL), A6JKU2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEGLVLLKALVTRLLFLLHSLVAVWRVTWVKEEHRYWLLALLNLLLVLETVLTLKFKRGRGYKW
LSPAIFLYLINIMPSLWLLEMHHGNQYCSTQSETAAQNFSGRGDINQTLSSHRATDGVGNILEL
ARGFVDNLSMVCEPVWTLGLHQTLLLILIIGRWLLPIGGTITRDQLSELLLMFVGTAADILEFT
TETLKENNVRNNPALVSGILVVWTWSMLQFPLDLAVQLKLVCPASVKARGFLRVFLCQYSADLW
AIGLSFFIQDGPFLVVRLVLMIYFKVINHMLVFFAVKNSLVMALHFYRLVALIMATRDFMQDHP
ESPKTEHSGPDQPSESGPSEWEDTSPEALPLRISPVTSEESYPTTP

hide sequence

RefSeq Acc Id:

ENSRNOP00000038308 ⟸ ENSRNOT00000038095

RefSeq Acc Id:	XP_038954672 ⟸ XM_039098744
- Peptide Label:	isoform X1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADJ8-F1-model_v2	AlphaFold	D4ADJ8	1-366	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309273	AgrOrtholog
BioCyc Gene	G2FUF-3927	BioCyc
Ensembl Genes	ENSRNOG00000027859	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000038095	ENTREZGENE
	ENSRNOT00000038095.4	UniProtKB/TrEMBL
InterPro	Transmembrane_protein_26	UniProtKB/TrEMBL
KEGG Report	rno:309724	UniProtKB/TrEMBL
NCBI Gene	309724	ENTREZGENE
PANTHER	PTHR22168	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 26	UniProtKB/TrEMBL
Pfam	Tmem26	UniProtKB/TrEMBL
PhenoGen	Tmem26	PhenoGen
RatGTEx	ENSRNOG00000027859	RatGTEx
UniProt	A6JKU2	ENTREZGENE, UniProtKB/TrEMBL
	D4ADJ8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Tmem26	transmembrane protein 26	Tmem26_predicted	transmembrane protein 26 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Tmem26_predicted	transmembrane protein 26 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar