Model Identifier
BIOMD0000000267
Short description
Lebeda2008 - BoNT paralysis (3 step model)
The onset of paralysis of skeletal muscles induced by BoNT/A at the isolated rat neuromuscular junction is describing in the model. This is the 3-step model described in the paper. This model is the reduced form of the model developed my Simpson 1980; PMID:   6243359  , i.e., it omits three unknown parameters that represents the binding sites for each species of the toxin. The extension to this model, i.e. the 4-step model described in the paper is BIOMD0000000178.

This model is described in the article:

Lebeda FJ, Adler M, Erickson K, Chushak Y.
J Pharmacokinet Pharmacodyn 2008 Jun; 35(3): 251-267

Abstract:

Experimental studies have demonstrated that botulinum neurotoxin serotype A (BoNT/A) causes flaccid paralysis by a multi-step mechanism. Following its binding to specific receptors at peripheral cholinergic nerve endings, BoNT/A is internalized by receptor-mediated endocytosis. Subsequently its zinc-dependent catalytic domain translocates into the neuroplasm where it cleaves a vesicle-docking protein, SNAP-25, to block neurally evoked cholinergic neurotransmission. We tested the hypothesis that mathematical models having a minimal number of reactions and reactants can simulate published data concerning the onset of paralysis of skeletal muscles induced by BoNT/A at the isolated rat neuromuscular junction (NMJ) and in other systems. Experimental data from several laboratories were simulated with two different models that were represented by sets of coupled, first-order differential equations. In this study, the 3-step sequential model developed by Simpson (J Pharmacol Exp Ther 212:16-21,1980) was used to estimate upper limits of the times during which anti-toxins and other impermeable inhibitors of BoNT/A can exert an effect. The experimentally determined binding reaction rate was verified to be consistent with published estimates for the rate constants for BoNT/A binding to and dissociating from its receptors. Because this 3-step model was not designed to reproduce temporal changes in paralysis with different toxin concentrations, a new BoNT/A species and rate (k(S)) were added at the beginning of the reaction sequence to create a 4-step scheme. This unbound initial species is transformed at a rate determined by k(S) to a free species that is capable of binding. By systematically adjusting the values of k(S), the 4-step model simulated the rapid decline in NMJ function (k(S) >or= 0.01), the less rapid onset of paralysis in mice following i.m. injections (k (S) = 0.001), and the slow onset of the therapeutic effects of BoNT/A (k(S) < 0.001) in man. This minimal modeling approach was not only verified by simulating experimental results, it helped to quantitatively define the time available for an inhibitor to have some effect (t(inhib)) and the relation between this time and the rate of paralysis onset. The 4-step model predicted that as the rate of paralysis becomes slower, the estimated upper limits of (t(inhib)) for impermeable inhibitors become longer. More generally, this modeling approach may be useful in studying the kinetics of other toxins or viruses that invade host cells by similar mechanisms, e.g., receptor-mediated endocytosis.

To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

Format
SBML (L2V4)
Related Publication
  • Onset dynamics of type A botulinum neurotoxin-induced paralysis.
  • Frank J Lebeda, Michael Adler, Keith Erickson, Yaroslav Chushak
  • Journal of pharmacokinetics and pharmacodynamics , 6/ 2008 , Volume 35 , Issue 3 , pages: 251-267 , PubMed ID: 18551355
Contributors
Submitter of the first revision: Vijayalakshmi Chelliah
Submitter of this revision: Lucian Smith
Curator: Lucian Smith
Modeller: Vijayalakshmi Chelliah

Metadata information

is (2 statements)
BioModels Database BIOMD0000000267
BioModels Database MODEL1009070000

isDescribedBy (1 statement)
PubMed 18551355

isDerivedFrom (1 statement)
PubMed 6243359

hasTaxon (3 statements)
Taxonomy Mus musculus
Taxonomy Rattus norvegicus
Taxonomy Homo sapiens

isVersionOf (5 statements)
hasProperty (2 statements)
Human Disease Ontology botulism
Mathematical Modelling Ontology Ordinary differential equation model


Curation status
Curated


Connected external resources