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Report for CCDS19199.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
19199.1 |
Public |
Mus musculus |
5 |
Slc5a1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 19199.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000011178.4 |
ENSMUSP00000011178.2 |
Accepted |
alive |
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NCBI |
NM_019810.4 |
NP_062784.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_062784.3 |
665 |
Q8C3K6 |
665 |
99.6992% |
0 |
2 |
Chromosomal Locations for CCDS 19199.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1998 nt): ATGGACAGTAGCACCTTGAGCCCCGCGGTTACTGCCACCGATGCACCCATCCCGTCCTACGAGCGCATTC GCAATGCGGCTGACATCTCAGTCATCGTCATCTACTTCGTGGTGGTGATGGCTGTCGGGCTGTGGGCCAT GTTTTCCACTAATCGTGGTACCGTTGGAGGCTTCTTCCTGGCAGGCCGAAGTATGGTGTGGTGGCCGATT GGAGCCTCTCTCTTTGCCAGTAACATTGGAAGTGGTCACTTTGTGGGGCTGGCAGGCACAGGAGCAGCCG CAGGCATTGCCATGGGTGGCTTTGAATGGAACGCCTTGGTTTTGGTGGTTGTGCTGGGCTGGATATTTGT CCCGATTTACATCAAGGCCGGGGTGGTGACGATGCCGGAGTATCTGCGGAAGCGGTTTGGAGGCAAGAGA ATTCAGATCTACCTTTCCGTTCTGTCCCTGCTCCTCTACATCTTCACAAAGATCTCTGCAGACATCTTCT CCGGGGCTATATTCATCAATCTAGCCTTGGGCCTGGATATATACTTGGCCATTTTCATCCTGCTAGCAAT CACTGCCCTTTATACAATCACAGGGGGGCTGGCAGCTGTAATTTACACAGATACCCTGCAGACCGCGATC ATGCTGGTGGGGTCTTTTATCCTGACTGGGTTTGCTTTCAATGAAGTAGGAGGATATGAAGCCTTCATGG ACAAGTACATGAAAGCTATTCCAACTAAGGTTTCTAACGGAAATTTTACCGCCAAGGAAGAATGCTACAC ACCGAGGGCTGACTCATTCCACATATTCAGAGACCCCATTACTGGAGACATGCCGTGGCCTGGGCTCATT TTTGGCCTGGCCATCCTCGCCCTGTGGTACTGGTGTACGGATCAGGTCATTGTGCAGCGATGCCTCTCGG CCAAGAACATGTCTCACGTGAAGGCTGGCTGTACCCTGTGTGGCTATCTGAAGCTACTGCCCATGTTCCT CATGGTGATGCCAGGAATGATCAGCCGGATTCTATATACAGAAAAAATCGCCTGTGTCCTCCCTGAAGAA TGTCAGAAATACTGCGGCACACCAGTGGGCTGTACCAACATCGCCTACCCCACGCTCGTGGTGGAACTCA TGCCTAATGGACTGCGAGGCCTGATGCTGTCTGTCATGATGGCTTCCCTCATGAGCTCCTTGACCTCCAT CTTCAACAGCGCCAGTACTCTCTTCACCATGGACATCTACACCAAGATCCGGAAGAAGGCATCTGAGAAG GAGCTCATGATTGCAGGAAGGTTGTTCATCCTCGTGCTGATTGGCATCAGCATTGCCTGGGTACCCATTG TACAGTCTGCTCAAAGTGGGCAGCTCTTTGATTACATCCAGTCTATCACCAGTTACCTGGGGCCGCCCAT TGCAGCTGTCTTCCTGCTTGCCATTTTCTGCAAGAGAGTCAATGAACAAGGAGCCTTCTGGGGACTGATC CTGGGCTTCCTGATTGGAATCTCCCGTATGATCACTGAGTTTGCCTATGGAACTGGGAGCTGCATGGAGC CCAGCAACTGCCCCAAGATCATCTGTGGGGTCCACTATTTGTACTTTGCCATCATCCTCTTCGTCATCAG CGTCATCACCATCTTGATCATCTCCTTCCTCACCAAGCCCATTCCAGACGTGCACCTGTACCGTTTGTGT TGGAGTCTACGCAACAGCAAGGAAGAGCGAATCGACCTGGATGCAGGAGAGGAGGAGGACATCCCAGAGG ACTCCAAGGACACAATTGAAATAGACACAGAAGCCCCCCAGAAGAAGAAAGGATGCTTCAGGAGAGCATA TGACCTGTTCTGTGGGCTGGACCAGGATAAAGGACCAAAGATGACTAAGGAGGAGGAGGAAGCCATGAAG ATGAAGATGACAGACACTTCTGAGAAGCCTTTGTGGAGGACAGTGGTGAACATCAACGGTATTATCCTGC TGGCGGTAGCTGTCTTCTGCCATGCCTATTTTGCCTGA
Translation (665 aa): MDSSTLSPAVTATDAPIPSYERIRNAADISVIVIYFVVVMAVGLWAMFSTNRGTVGGFFLAGRSMVWWPI GASLFASNIGSGHFVGLAGTGAAAGIAMGGFEWNALVLVVVLGWIFVPIYIKAGVVTMPEYLRKRFGGKR IQIYLSVLSLLLYIFTKISADIFSGAIFINLALGLDIYLAIFILLAITALYTITGGLAAVIYTDTLQTAI MLVGSFILTGFAFNEVGGYEAFMDKYMKAIPTKVSNGNFTAKEECYTPRADSFHIFRDPITGDMPWPGLI FGLAILALWYWCTDQVIVQRCLSAKNMSHVKAGCTLCGYLKLLPMFLMVMPGMISRILYTEKIACVLPEE CQKYCGTPVGCTNIAYPTLVVELMPNGLRGLMLSVMMASLMSSLTSIFNSASTLFTMDIYTKIRKKASEK ELMIAGRLFILVLIGISIAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEQGAFWGLI LGFLIGISRMITEFAYGTGSCMEPSNCPKIICGVHYLYFAIILFVISVITILIISFLTKPIPDVHLYRLC WSLRNSKEERIDLDAGEEEDIPEDSKDTIEIDTEAPQKKKGCFRRAYDLFCGLDQDKGPKMTKEEEEAMK MKMTDTSEKPLWRTVVNINGIILLAVAVFCHAYFA
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