Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STX1A ENSBTAG00000017075

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Description

syntaxin 1A [Source:VGNC Symbol;Acc:VGNC:35436]

Location

Primary_assembly 25: 33,543,228-33,561,032 forward strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000084274.2	STX1A-203	2619	429aa	ENSBTAP00000064870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P32850	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000105263.1	STX1A-205	2795	424aa	ENSBTAP00000096171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000003031.6	STX1A-204	2461	379aa	ENSBTAP00000003031.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3X6B7	-
ENSBTAT00000110736.1	STX1A-202	1216	354aa	ENSBTAP00000101663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000067038.2	STX1A-201	1076	311aa	ENSBTAP00000060374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXU8	-

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Summary

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