Transcript: ENSDART00000079597.4 vps36-201

Description

vacuolar protein sorting 36 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-7753]

Location

Chromosome 10: 24,660,017-24,677,414 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features, is associated with 373 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057021.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000079597.4	vps36-201	1904	382aa	ENSDARP00000074049.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190695.1	vps36-206	4791	410aa	ENSDARP00000154878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000142617.3	vps36-203	658	147aa	ENSDARP00000113042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139641.3	vps36-202	610	161aa	ENSDARP00000122484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147974.2	vps36-205	908	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000142893.2	vps36-204	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,904 bps, Translation length: 382 residues

Version

ENSDART00000079597.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000079597.4 vps36-201

Summary

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Transcript: ENSDART00000079597.4 vps36-201

Summary

About Us

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