Transcript: ENSDART00000102563.5 phf10-201

Description

PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]

Location

About this transcript

This transcript has 12 exons, is annotated with 21 domains and features, is associated with 542 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102563.5	phf10-201	1685	490aa	ENSDARP00000093339.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Z4YI11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000121598.3	phf10-202	1665	369aa	ENSDARP00000111415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172165.2	phf10-203	725	112aa	ENSDARP00000138342.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,685 bps, Translation length: 490 residues

Version

ENSDART00000102563.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.