Transcript: ENSDART00000127494.3 nrg2b-201

Description

neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]

Location

Chromosome 14: 8,328,645-8,436,097 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 1915 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000086585.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129055.3	nrg2b-202	4186	705aa	ENSDARP00000108874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000127494.3	nrg2b-201	1873	599aa	ENSDARP00000109596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000164551.2	nrg2b-203	529	176aa	ENSDARP00000136138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171586.2	nrg2b-204	798	138aa	ENSDARP00000140639.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,873 bps, Translation length: 599 residues

Version

ENSDART00000127494.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000127494.3 nrg2b-201

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Transcript: ENSDART00000127494.3 nrg2b-201

Summary

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