Transcript: ENSDART00000134910.2 nr2f2-204

Description

nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]

Location

Chromosome 18: 23,873,455-23,874,929 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 35 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040926.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130163.4	nr2f2-202	3838	422aa	ENSDARP00000107285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91430	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000059976.4	nr2f2-201	1953	428aa	ENSDARP00000059975.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134910.2	nr2f2-204	419	140aa	ENSDARP00000115762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000133361.3	nr2f2-203	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 419 bps, Translation length: 140 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000134910.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134910.2 nr2f2-204

Summary

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Transcript: ENSDART00000134910.2 nr2f2-204

Summary

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