Transcript: ENSDART00000138885.4 wdr33-203

Description

WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]

Location

Chromosome 2: 5,410,432-5,443,745 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 38 domains and features, is associated with 930 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018272.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121641.3	wdr33-202	1386	290aa	ENSDARP00000127258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000138885.4	wdr33-203	4793	1125aa	ENSDARP00000115996.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000025131.10	wdr33-201	4202	1102aa	ENSDARP00000027484.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B6D6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,793 bps, Translation length: 1,125 residues

Version

ENSDART00000138885.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138885.4 wdr33-203

Summary

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Transcript: ENSDART00000138885.4 wdr33-203

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