Transcript: ENSDART00000144001.3

Location

Chromosome 10: 6,781,123-6,867,282 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 23 domains and features, is associated with 1792 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078441.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000144001.3	-	5059	1224aa	ENSDARP00000115535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000109744.4	-	3912	1303aa	ENSDARP00000097491.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000141047.2	-	795	187aa	ENSDARP00000112760.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131413.2	-	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000140162.3	-	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000132873.3	-	327	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 5,059 bps, Translation length: 1,224 residues

Version

ENSDART00000144001.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000144001.3

Summary

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Transcript: ENSDART00000144001.3

Summary

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