Transcript: ENSDART00000147359.2 wtap-202

Description

WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 199 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062552.6	wtap-201	2035	423aa	ENSDARP00000062551.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000147359.2	wtap-202	1157	151aa	ENSDARP00000119535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,157 bps, Translation length: 151 residues

Version

ENSDART00000147359.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.